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BaseInfo

ncRNA ID	novel_osa_miR3201
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:15251623-15251720 [+]
Reference genome	IRGSP-1.0
Source	SRR2040386;SRR2040388;SRR2040410
Length	24
Mature sequence(if miRNA)	1 - ACUUAGUACUGGAUGUGACACAUC - 24
Stem-loop(if miRNA)	--AC    U             C UC   A   U         C   UA     UUAG ACUGGAUGUGACA A  CUA UAC ACGAAUUUG ACA  U     |||| ||||||||||||| |  ||| ||| ||||||||| |||     GAUC UGAUCUAUACUGU U  GAU AUG UGCUUAAAU UGU  C UUUA    C             A UA   C   U         C   UU
Stem-loop sequence	ACUUAGUACUGGAUGUGACACAUCCUAAUACUACGAAUUUGCACAUAUCUUUGUCUAAAUUCGUUGUACUAGAUUAUGUCAUAUCUAGUCCUAGAUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT829763.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   |||*||||||||||=||||||||| targets:1024   GAUAUGUCACAUCCGGUACUAAGU   1047 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA105M10, full insert sequence	NA	coding protein	psRNATarget
AK100614.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   |||*||||*||||||||||||=|| targets:1610   GAUAUGUCCCAUCCAGUACUAGGU   1633 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023108A15, full insert sequence	NA	coding protein	psRNATarget
HI403880.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   *||*|||||||||||||||||*|| targets:76   AAUAUGUCACAUCCAGUACUAUGU   99 Target Full Sequence	1.5	Sequence 2005 from Patent EP2074227	NA	coding protein	psRNATarget
JB164341.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   *||*|||||||||||||||||*|| targets:76   AAUAUGUCACAUCCAGUACUAUGU   99 Target Full Sequence	1.5	Sequence 2005 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236010.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   *||*|||||||||||||||||*|| targets:76   AAUAUGUCACAUCCAGUACUAUGU   99 Target Full Sequence	1.5	Sequence 2005 from Patent EP2985353	NA	coding protein	psRNATarget
AK063301.1	ncRNA:24   CUACACAGUGUAGGUCAUGAUUCA   1   ||||*|||*||||||*|||||||| targets:579   GAUGGGUCUCAUCCAAUACUAAGU   602 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-113-F03, full insert sequence	NA	coding protein	psRNATarget