ncRNA ID | novel_osa_miR3200 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:10474198-10474398 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040386 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACGUAGAUUAUCGACAAAACCGA - 24 |
Stem-loop(if miRNA) |
--            C        CG   C       CCU           C                U                 ------       -UG  U   AACGUAGAUUAU GACAAAAC  AUU CAUAACC   AGGCUAUUUUG GAGACGAAUCUAAUGA GUAUAUUAAUCUAUGAU      UAGUGAU   AU A   |||||||||||| ||||||||  ||| |||||||   ||||||||||| |||||||||||||||| |||||||||||||||||      |||||||   ||   UUGUAUUUAAUG CUGUUUUG  UAA GUAUUGG   UCCGAUAAAAC CUCUGCUUAGAUUGCU CAUAUAAUUAGGUACUA      GUCACUA   UG C AU            A        AG   A       AAU           A                C                 AACGAU       CGA  U |
Stem-loop sequence | AACGUAGAUUAUCGACAAAACCGAUUCCAUAACCCCUAGGCUAUUUUGCGAGACGAAUCUAAUGAUGUAUAUUAAUCUAUGAUUAGUGAUUGAUUACUGUAGCAUCACUGUAGCAAAUCAUGGAUUAAUAUACCUCGUUAGAUUCGUCUCACAAAAUAGCCUUAAGGUUAUGAAAUGAGUUUUGUCAGUAAUUUAUGUUUA |