ncRNA ID | novel_osa_miR3184 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:7709706-7709898 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040386 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGAUGGCAUUUCUUGGAACUCAU - 24 |
Stem-loop(if miRNA) |
--                    A         C                    A  A                  A C          UC   A GA   GAGUUCCAAGAAAUGUCAUC UACAGACGA UUUGUCCCAAAAAUGCCAUC CC UUAGGGUUUCGUCCAUUC G GCCGUUAAGU  UAU G  U   |||||||||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||| | ||||||||||  ||| |   CUCAAGGUUCUUUACGGUAG AUGUUUGCU AAACAGGGUUUUUACGGUAG GG AAUCCCAAGGCAGGUAAG C CGGCAAUUUA  GUG C  G UA                    C         A                    C  C                  G A          -U   A AA |
Stem-loop sequence | GAGUUCCAAGAAAUGUCAUCAUACAGACGACUUUGUCCCAAAAAUGCCAUCACCAUUAGGGUUUCGUCCAUUCAGCGCCGUUAAGUUCUAUAGGAUGAACAGUGUAUUUAACGGCACGGAAUGGACGGAACCCUAACGGCGAUGGCAUUUUUGGGACAAAAUCGUUUGUACGAUGGCAUUUCUUGGAACUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015763566.1 |
|
0.0 | PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC107276166), mRNA | receptor-like protein 12(LOC107276166) | coding protein | psRNATarget |