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BaseInfo

ncRNA ID novel_osa_miR3184
Species Oryza sativa
Class miRNA
Genome position Chr10:7709706-7709898 [-]
Reference genome IRGSP-1.0
Source SRR2040386
Length 24
Mature sequence(if miRNA) 1 - ACGAUGGCAUUUCUUGGAACUCAU - 24
Stem-loop(if miRNA) --                    A         C                    A  A                  A C          UC   A GA
  GAGUUCCAAGAAAUGUCAUC UACAGACGA UUUGUCCCAAAAAUGCCAUC CC UUAGGGUUUCGUCCAUUC G GCCGUUAAGU  UAU G  U
  |||||||||||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||| | ||||||||||  ||| |
  CUCAAGGUUCUUUACGGUAG AUGUUUGCU AAACAGGGUUUUUACGGUAG GG AAUCCCAAGGCAGGUAAG C CGGCAAUUUA  GUG C  G
UA                    C         A                    C  C                  G A          -U   A AA
Stem-loop sequence GAGUUCCAAGAAAUGUCAUCAUACAGACGACUUUGUCCCAAAAAUGCCAUCACCAUUAGGGUUUCGUCCAUUCAGCGCCGUUAAGUUCUAUAGGAUGAACAGUGUAUUUAACGGCACGGAAUGGACGGAACCCUAACGGCGAUGGCAUUUUUGGGACAAAAUCGUUUGUACGAUGGCAUUUCUUGGAACUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015763566.1
ncRNA:24   UACUCAAGGUUCUUUACGGUAGCA   1
  =|||||||||||||||||||||||
targets:3487   GUGAGUUCCAAGAAAUGCCAUCGU   3510

0.0 PREDICTED: Oryza sativa Japonica Group receptor-like protein 12 (LOC107276166), mRNA receptor-like protein 12(LOC107276166) coding protein psRNATarget