ncRNA ID | novel_osa_miR3155 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr7:21981274-21981351 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040385 |
Length | 25 |
Mature sequence(if miRNA) | 54 - UCAGUGACUCAACUGCAUGUGCAGU - 78 |
Stem-loop(if miRNA) |
----U UG                    A      A UG       G  UGCAGUUGAGUCACUGACAU UGGGUC U  CA      |  |||||||||||||||||||| |||||| |  |A      U  ACGUCAACUCAGUGACUGUA ACCCAG G  GA UGACG GU                    C      - GU  |
Stem-loop sequence | UGUGUGCAGUUGAGUCACUGACAUAUGGGUCAUUGCAAAGUGGGACCCACAUGUCAGUGACUCAACUGCAUGUGCAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT836248.1 |
|
1.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106I11, full insert sequence | NA | coding protein | psRNATarget |