ncRNA ID | novel_osa_miR3113 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:14130508-14130644 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040384;SRR2040393;SRR2040398;SRR3123651;SRR3234045;SRR4407962;SRR1654491;SRR1738240 |
Length | 24 |
Mature sequence(if miRNA) | 114 - AACUGCCUUAAGGAAGUCGAUGCU - 137 |
Stem-loop(if miRNA) |
---C  A  A           U    U   A     AU            CG     A  GU      A     UC AC UUCCUUAAGGU GUUC UUC AACCC  ACAAGGUUCCAC  CCUGC UU  UCCAAG G     || || ||||||||||| |||| ||| |||||  ||||||||||||  ||||| ||  |||||| U     AG UG AAGGAAUUCCG CAAG AAG UUGGG  UGUUCCAAGGUG  GGAUG AA  AGGUUC G UCGU  C  -           U    C   G     AU            AA     A  GU      U |
Stem-loop sequence | CUCAACAUUCCUUAAGGUUGUUCUUUCAAACCCAUACAAGGUUCCACCGCCUGCAUUGUUCCAAGAGUGUCUUGGAUGAAAGUAGGAAGUGGAACCUUGUUAGGGUUGGAACGAACUGCCUUAAGGAAGUCGAUGCU |