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BaseInfo

ncRNA ID novel_osa_miR3113
Species Oryza sativa
Class miRNA
Genome position Chr1:14130508-14130644 [+]
Reference genome IRGSP-1.0
Source SRR2040384;SRR2040393;SRR2040398;SRR3123651;SRR3234045;SRR4407962;SRR1654491;SRR1738240
Length 24
Mature sequence(if miRNA) 114 - AACUGCCUUAAGGAAGUCGAUGCU - 137
Stem-loop(if miRNA) ---C  A  A           U    U   A     AU            CG     A  GU      A
    UC AC UUCCUUAAGGU GUUC UUC AACCC  ACAAGGUUCCAC  CCUGC UU  UCCAAG G
    || || ||||||||||| |||| ||| |||||  ||||||||||||  ||||| ||  |||||| U
    AG UG AAGGAAUUCCG CAAG AAG UUGGG  UGUUCCAAGGUG  GGAUG AA  AGGUUC G
UCGU  C  -           U    C   G     AU            AA     A  GU      U
Stem-loop sequence CUCAACAUUCCUUAAGGUUGUUCUUUCAAACCCAUACAAGGUUCCACCGCCUGCAUUGUUCCAAGAGUGUCUUGGAUGAAAGUAGGAAGUGGAACCUUGUUAGGGUUGGAACGAACUGCCUUAAGGAAGUCGAUGCU