ncRNA ID | novel_osa_miR3102 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:16173280-16173443 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040384 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UACCCUUAGAUAUUUCCGGUAC - 22 |
Stem-loop(if miRNA) |
--               -  G         U   CCACUU    AUUU   C       ----UG    -     CA  AAUUG    C   UACCCUUAGAUAUUU CC GUACUUUUG ACA      UCAA    GAU CAAAUCU      GCAA ACUUU  CA     UUGA A   ||||||||||||||| || ||||||||| |||      ||||    ||| |||||||      |||| |||||  ||     ||||   AUGGGAAUCUAUAAA GG CAUGAAAAC UGU      AGUU    UUA GUUUAGA      CGUU UGAGA  GU     AAUU A AU               A  G         -   ---AUU    ----   U       UAACUA    A     UA  CAUUA    A |
Stem-loop sequence | UACCCUUAGAUAUUUCCGGUACUUUUGUACACCACUUUCAAAUUUGAUCCAAAUCUUGGCAAACUUUCACAAAUUGUUGACAAAUUAAAUUACUGAUAGAGUAUUGCAUCAAUAGAUUUGUAUUUUGAUUAUGUCAAAAGUACGGGAAAAUAUCUAAGGGUAUA |