Search result

BaseInfo

ncRNA ID novel_osa_miR3095
Species Oryza sativa
Class miRNA
Genome position Chr8:3579812-3579865 [+]
Reference genome IRGSP-1.0
Source SRR2040384;SRR2040390;SRR2040391;SRR2040399;SRR2040402;SRR2040404;SRR2040411;SRR3123645;SRR1738226
Length 24
Mature sequence(if miRNA) 1 - UUAAAUGGACCGCACGCGAAAAUG - 24
Stem-loop(if miRNA) --UUAAAU  A               A
        GG CCGCACGCGAAAAUG G
        || |||||||||||||||
        CC GGCGUGCGCUUUUAU C
AGAAUUAU  A               C
Stem-loop sequence UUAAAUGGACCGCACGCGAAAAUGAGCCUAUUUUCGCGUGCGGACCUAUUAAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288261.1
ncRNA:24   GUAAAAGCGCACGCCAGGUAAAUU   1
  *||*|||||*||||||||||*|||
targets:3161   GAUCUUCGCAUGCGGUCCAUAUAA   3184

2.5 Oryza sativa Japonica Group cDNA, clone: J090015P07, full insert sequence NA coding protein psRNATarget
AK110674.1
ncRNA:24   GUAAAAGCGCACGCCAGGUAAAUU   1
  *|||*||*|||||||||||*||||
targets:472   GAUUAUCCCGUGCGGUCCACUUAA   495

2.5 Oryza sativa Japonica Group cDNA clone:002-169-G07, full insert sequence NA coding protein psRNATarget
JB164503.1
ncRNA:24   GUAAAAGCGCACGCCAGGUAAAUU   1
  *|||*||*|||||||||||*||||
targets:7   GAUUAUCCCGUGCGGUCCACUUAA   30

2.5 Sequence 2167 from Patent EP2559767 NA coding protein psRNATarget
HI404042.1
ncRNA:24   GUAAAAGCGCACGCCAGGUAAAUU   1
  *|||*||*|||||||||||*||||
targets:7   GAUUAUCCCGUGCGGUCCACUUAA   30

2.5 Sequence 2167 from Patent EP2074227 NA coding protein psRNATarget
LQ236172.1
ncRNA:24   GUAAAAGCGCACGCCAGGUAAAUU   1
  *|||*||*|||||||||||*||||
targets:7   GAUUAUCCCGUGCGGUCCACUUAA   30

2.5 Sequence 2167 from Patent EP2985353 NA coding protein psRNATarget