ncRNA ID | novel_osa_miR3090 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:12775793-12775870 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR4407962;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGAGUAGAGUAGAAGAAGUUGG - 24 |
Stem-loop(if miRNA) |
-AGA     G            U   A    ---U    A     GAGUA AGUAGAAGAAGU GGA GAAU    CCGG G     ||||| |||||||||||| ||| ||||    |||| U     UUUAU UUAUUUUCUUUA CCU CUUA    GGCU U AUUA     A            U   -    UAAU    G |
Stem-loop sequence | AGAGAGUAGAGUAGAAGAAGUUGGAAGAAUUCCGGAGUUGUCGGUAAUAUUCUCCUAUUUCUUUUAUUAUAUUUAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288356.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090024J04, full insert sequence | NA | coding protein | psRNATarget |