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BaseInfo

ncRNA ID	novel_osa_miR3088
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:17881080-17881162 [-]
Reference genome	IRGSP-1.0
Source	SRR2040384
Length	25
Mature sequence(if miRNA)	59 - AGCGAUUUUAGAGGGAUGUGAUACU - 83
Stem-loop(if miRNA)	--  C                       C   --G  AUAUG   AG GAUUUUAGAGGGAUGUGAUACUU CUA   UG     A   || ||||||||||||||||||||||| |||   ||     A   UC CUAAAAUCUCCCUACACUGUGAA GAU   AC     U AU  C                       A   AGA  AAGUC
Stem-loop sequence	AGCGAUUUUAGAGGGAUGUGAUACUUCCUAGUGAUAUGAAUCUGAACAAGAUAGAAAGUGUCACAUCCCUCUAAAAUCCCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792363.1	ncRNA:25   UCAUAGUGUAGGGAGAUUUUAGCGA   1   |||=||||||||||||||||||*|| targets:2085   AGUGUCACAUCCCUCUAAAAUCCCU   2109 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X2, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
XM_015792362.1	ncRNA:25   UCAUAGUGUAGGGAGAUUUUAGCGA   1   |||=||||||||||||||||||*|| targets:2202   AGUGUCACAUCCCUCUAAAAUCCCU   2226 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X1, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
AK288180.1	ncRNA:25   UCAUAGUGUAGGGAGAUUUUAGCGA   1   |||=||||||||||||||||||*|| targets:1336   AGUGUCACAUCCCUCUAAAAUCCCU   1360 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090005C24, full insert sequence	NA	coding protein	psRNATarget