ncRNA ID | novel_osa_miR3085 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:10530807-10530872 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR1555751;SRR4407957;SRR1556018;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUUUAUAUUGAUUUUGGACGGCUG - 24 |
Stem-loop(if miRNA) |
-AUUUAUA          A     -GA     A         UUGAUUUUGG CGGCU   GAUUA U         |||||||||| |||||   |||||         GGCUAGAACC GUUGA   CUAGU C AUUCGGUA          A     GAG     U |
Stem-loop sequence | AUUUAUAUUGAUUUUGGACGGCUGAGAUUAAUCUUGAUCGAGAGUUGACCAAGAUCGGAUGGCUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK241978.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J075097A19, full insert sequence | NA | coding protein | psRNATarget | |||||||||
CT835664.1 |
|
2.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108E04, full insert sequence | NA | coding protein | psRNATarget |