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BaseInfo

ncRNA ID novel_osa_miR3072
Species Oryza sativa
Class miRNA
Genome position Chr4:16693661-16693752 [-]
Reference genome IRGSP-1.0
Source SRR2040384
Length 24
Mature sequence(if miRNA) 69 - AUUAUAAGACUCUCUACGAUUGCC - 92
Stem-loop(if miRNA) --A          C    C                  --A  C   A
   UUAUAAGACU UCUA GAUUGCCCACAUUUAUAU   UA GUU A
   |||||||||| |||| ||||||||||||||||||   || |||
   AAUGUUCUGA AGAU CUAAUGGGUGUAAGUAUA   AU UAA U
UCC          A    C                  CAG  C   G
Stem-loop sequence AUUAUAAGACUCUCUACGAUUGCCCACAUUUAUAUAUACGUUAAUGAAUCUAGACAUAUGAAUGUGGGUAAUCCUAGAAAGUCUUGUAACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT828685.1
ncRNA:24   CC-GUUAGCAUCUCUCAGAAUAUUA   1
  ||-||||*|||||*|||||||||||
targets:1370   GGACAAUAGUAGAAAGUCUUAUAAU   1394

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA124K24, full insert sequence NA coding protein psRNATarget