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BaseInfo

ncRNA ID novel_osa_miR3059
Species Oryza sativa
Class miRNA
Genome position Chr2:855711-855893 [-]
Reference genome IRGSP-1.0
Source SRR2040384;SRR2040389;SRR2040399;SRR2857733
Length 22
Mature sequence(if miRNA) 1 - UUGAAGUAGUCUGACUUUGACU - 22
Stem-loop(if miRNA) --         A                CUUAG       AA   A   A   C    -UCAAC     ACAAA       UGAA    UAU
  UCAAAGUCA ACUGCUUUAGGUUUGA     UUUGUAG  AAA AUA UAA AUUU      CCAAG     UUUAUUA    AAUA   U
  ||||||||| ||||||||||||||||     |||||||  ||| ||| ||| ||||      |||||     |||||||    ||||
  AGUUUCAGU UGAUGAAGUUCAAACU     AAAUAUC  UUU UAU AUU UAAA      GGUUU     AAGUAAU    UUAU   A
UC         C                UAUUA       CG   A   C   A    UAUUAU     AAUCA       UUAG    UAA
Stem-loop sequence UCAAAGUCAAACUGCUUUAGGUUUGACUUAGUUUGUAGAAAAAAAUAAUAACAUUUUCAACCCAAGACAAAUUUAUUAUGAAAAUAUAUUAAAUUAUUGAUUUAAUGAAACUAAUUUGGUAUUAUAAAUAUUACUAUAUUUGCCUAUAAAAUUAUUCAAACUUGAAGUAGUCUGACUUUGACU