ncRNA ID | novel_osa_miR3059 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr2:855711-855893 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040384;SRR2040389;SRR2040399;SRR2857733 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUGAAGUAGUCUGACUUUGACU - 22 |
Stem-loop(if miRNA) |
--         A                CUUAG       AA   A   A   C    -UCAAC     ACAAA       UGAA    UAU   UCAAAGUCA ACUGCUUUAGGUUUGA     UUUGUAG  AAA AUA UAA AUUU      CCAAG     UUUAUUA    AAUA   U   ||||||||| ||||||||||||||||     |||||||  ||| ||| ||| ||||      |||||     |||||||    ||||   AGUUUCAGU UGAUGAAGUUCAAACU     AAAUAUC  UUU UAU AUU UAAA      GGUUU     AAGUAAU    UUAU   A UC         C                UAUUA       CG   A   C   A    UAUUAU     AAUCA       UUAG    UAA |
Stem-loop sequence | UCAAAGUCAAACUGCUUUAGGUUUGACUUAGUUUGUAGAAAAAAAUAAUAACAUUUUCAACCCAAGACAAAUUUAUUAUGAAAAUAUAUUAAAUUAUUGAUUUAAUGAAACUAAUUUGGUAUUAUAAAUAUUACUAUAUUUGCCUAUAAAAUUAUUCAAACUUGAAGUAGUCUGACUUUGACU |