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BaseInfo

ncRNA ID	novel_osa_miR3055
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:14086570-14086650 [-]
Reference genome	IRGSP-1.0
Source	SRR1555747;SRR1556020
Length	24
Mature sequence(if miRNA)	1 - AAUGGAUCUUCGCAUGCGGCUAAU - 24
Stem-loop(if miRNA)	--C                                   UC    AGCCGCAUGCGAAGAUCCAUUAUCGCAUGCGGCUG  U    |||||||||||||||||||||||||||||||||||  U    UCGGCGUACGCUUCUAGGUAAUAGCGUACGCCGAC  A UAA                                   CA
Stem-loop sequence	CAGCCGCAUGCGAAGAUCCAUUAUCGCAUGCGGCUGUCUUAACCAGCCGCAUGCGAUAAUGGAUCUUCGCAUGCGGCUAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779183.1	ncRNA:24   UAA-UCGGCGUACGCUUCUAGGUAA   1   *||-|||*|||||*||||||||||| targets:3531   CUUCAGCGGCAUGAGAAGAUCCAUU   3555 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278542 (LOC107278542), partial mRNA	uncharacterized LOC107278542(LOC107278542)	coding protein	psRNATarget
XM_015777644.1	ncRNA:24   UAAUCGGCGUACGCUUCUAGGUAA   1   |*|=*|||=*|||||||||||||| targets:637   ACUGUCCGUCUGCGAAGAUCCAUU   660 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group two-component response regulator ORR41 (LOC4334066), transcript variant X1, mRNA	two-component response regulator ORR41(LOC4334066)	coding protein	psRNATarget