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BaseInfo

ncRNA ID	novel_osa_miR3050
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:14768655-14768748 [-]
Reference genome	IRGSP-1.0
Source	SRR2040384
Length	24
Mature sequence(if miRNA)	71 - AAUCUAGAAUCGGAUGUGACAUAU - 94
Stem-loop(if miRNA)	--       A                          CA   C    U   AAUCUAG AUCGGAUGUGACAUAUUUUAAUACUA  AAU UAGA A   ||||||| ||||||||||||||||||||||||||  ||| ||||   UUGGAUC UAGCCUACACUGUAUGAGAUUAUGAU  UUA AUCU U AG       A                          AC   A    G
Stem-loop sequence	AAUCUAGAAUCGGAUGUGACAUAUUUUAAUACUACAAAUCUAGAUAUGUCUAAAUUCAUAGUAUUAGAGUAUGUCACAUCCGAUACUAGGUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015763486.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   |||||||=|||||||||=|||||| targets:1723   AUAUGUCGCAUCCGAUUUUAGAUU   1746 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group purple acid phosphatase 2-like (LOC107278020), mRNA	purple acid phosphatase 2-like(LOC107278020)	coding protein	psRNATarget
AK107145.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   ||||||=|||||||||*||||||| targets:1271   AUAUGUUACAUCCGAUACUAGAUU   1294 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-124-D07, full insert sequence	NA	coding protein	psRNATarget
XM_015782471.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   ||||||=|||||||||*||||||| targets:1311   AUAUGUUACAUCCGAUACUAGAUU   1334 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339433 (LOC4339433), mRNA	uncharacterized LOC4339433(LOC4339433)	coding protein	psRNATarget
AK067512.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   =|=|||||||||||||*||||||| targets:3672   GUGUGUCACAUCCGAUCCUAGAUU   3695 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence	NA	coding protein	psRNATarget
AK242602.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   |*|||||*||||||=||||||||| targets:3807   AAAUGUCCCAUCCGGUUCUAGAUU   3830 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090014K11, full insert sequence	NA	coding protein	psRNATarget
XM_015773937.1	ncRNA:24   UAUACAGUGUAGGCUAAGAUCUAA   1   *||-|||*||||||||*||||||| targets:1445   UUA-GUCCCAUCCGAUCCUAGAUU   1467 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group anthocyanin regulatory C1 protein (LOC4333088), mRNA	anthocyanin regulatory C1 protein(LOC4333088)	coding protein	psRNATarget