ncRNA ID | novel_osa_miR3049 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:16825962-16826008 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555747;SRR1556020 |
Length | 22 |
Mature sequence(if miRNA) | 26 - CAAGGCGCGGUAUCAUGAGGAC - 47 |
Stem-loop(if miRNA) |
--C      C  -    -   A  A    AAGGCG GG UAUC AUG GG C    |||||| || |||| ||| ||    UUCCGC CC GUAG UAC CC C CCC      -  U    C   A  A |
Stem-loop sequence | CAAGGCGCGGUAUCAUGAGGACCACCACAUCGAUGUCCCGCCUUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK287440.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J043015B19, full insert sequence | NA | coding protein | psRNATarget |