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BaseInfo

ncRNA ID novel_osa_miR3031
Species Oryza sativa
Class miRNA
Genome position Chr7:27032131-27032205 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 23
Mature sequence(if miRNA) 53 - UAUAUUUCUGGACAGAGGGAGUA - 75
Stem-loop(if miRNA) --UA       G  C        U  UAAC   C   UGA
    UAUUUCU GA AGAGGGAG AG    AGG UGG   A
    ||||||| || |||||||| ||    ||| |||
    AUAAAGA UU UUUUCCUU UC    UCC AUC   U
AACG       G  C        U  ----   -   UUU
Stem-loop sequence UAUAUUUCUGGACAGAGGGAGUAGUAACAGGCUGGUGAAUUUUCUACCUCUUUUCCUUUUCUUGAGAAAUAGCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK072098.1
ncRNA:23   AUGAGGGAGACAGGUCUUUAUAU   1
  |||||=|||||||||*|||||||
targets:3282   UACUCUCUCUGUCCACAAAUAUA   3304

2.5 Oryza sativa Japonica Group cDNA clone:J013118F23, full insert sequence NA coding protein psRNATarget