Search result

BaseInfo

ncRNA ID	novel_osa_miR3019
Species	Oryza sativa
Class	miRNA
Genome position	Chr9:4104861-4104907 [-]
Reference genome	IRGSP-1.0
Source	SRR2040383
Length	21
Mature sequence(if miRNA)	27 - CCAUUAUCGCAUGCGGCUGUC - 47
Stem-loop(if miRNA)	--                    C   CCAUUAUCGCAUGCGGCUGU C   |||||||||||||||||||| U   GGUAAUAGCGUACGCCGACG A UA                    A
Stem-loop sequence	CCAUUAUCGCAUGCGGCUGUCCUAAGCAGCCGCAUGCGAUAAUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164734.1	ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1   |||||||||||||||||||-|| targets:29   GACAGCCGCAUGCGAUAAUAGG   50 Target Full Sequence	3.0	Sequence 2398 from Patent EP2559767	NA	coding protein	psRNATarget
JB164734.1	ncRNA:21   CUGUCGGCGUACGCUAUUACC   1   *=||||||||||||||||||| targets:76   AGCAGCCGCAUGCGAUAAUGG   96 Target Full Sequence	0.0	Sequence 2398 from Patent EP2559767	NA	coding protein	psRNATarget
HI404273.1	ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1   |||||||||||||||||||-|| targets:29   GACAGCCGCAUGCGAUAAUAGG   50 Target Full Sequence	3.0	Sequence 2398 from Patent EP2074227	NA	coding protein	psRNATarget
HI404273.1	ncRNA:21   CUGUCGGCGUACGCUAUUACC   1   *=||||||||||||||||||| targets:76   AGCAGCCGCAUGCGAUAAUGG   96 Target Full Sequence	0.0	Sequence 2398 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236403.1	ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1   |||||||||||||||||||-|| targets:29   GACAGCCGCAUGCGAUAAUAGG   50 Target Full Sequence	3.0	Sequence 2398 from Patent EP2985353	NA	coding protein	psRNATarget
LQ236403.1	ncRNA:21   CUGUCGGCGUACGCUAUUACC   1   *=||||||||||||||||||| targets:76   AGCAGCCGCAUGCGAUAAUGG   96 Target Full Sequence	0.0	Sequence 2398 from Patent EP2985353	NA	coding protein	psRNATarget