ncRNA ID | novel_osa_miR3016 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:7932864-7933017 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040383;SRR1298758;SRR4407777;SRR1300837 |
Length | 25 |
Mature sequence(if miRNA) | 1 - CGGAGGUCAACUGACUGUGAUGGCA - 25 |
Stem-loop(if miRNA) |
--       CA    C           -UA   C   C              U    C     -UA   -GAA  G  U   CUAUCAC  UCAG UGACCUUUGUU   CCC AUG GAAAAGUCUAUUUU ACCC UAGAA   UAU    AU CU C   |||||||  |||| |||||||||||   ||| ||| |||||||||||||| |||| |||||   |||    || ||   GGUAGUG  AGUC ACUGGAGGCAA   GGG UAC UUUUUCAGAUAAAA UGGG AUCUU   GUG    UA GA U AC       UC    A           UUA   A   C              -    A     CAC   AUAG  G  U |
Stem-loop sequence | CUAUCACCAUCAGCUGACCUUUGUUUACCCCAUGCGAAAAGUCUAUUUUUACCCCUAGAAUAUAUGAAAUGCUUCUUAGGAUGAUAGUGCACUUCUAAGGGUAAAAUAGACUUUUUCCAUAGGGAUUAACGGAGGUCAACUGACUGUGAUGGCA |