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BaseInfo

ncRNA ID novel_osa_miR3016
Species Oryza sativa
Class miRNA
Genome position Chr9:7932864-7933017 [-]
Reference genome IRGSP-1.0
Source SRR2040383;SRR1298758;SRR4407777;SRR1300837
Length 25
Mature sequence(if miRNA) 1 - CGGAGGUCAACUGACUGUGAUGGCA - 25
Stem-loop(if miRNA) --       CA    C           -UA   C   C              U    C     -UA   -GAA  G  U
  CUAUCAC  UCAG UGACCUUUGUU   CCC AUG GAAAAGUCUAUUUU ACCC UAGAA   UAU    AU CU C
  |||||||  |||| |||||||||||   ||| ||| |||||||||||||| |||| |||||   |||    || ||
  GGUAGUG  AGUC ACUGGAGGCAA   GGG UAC UUUUUCAGAUAAAA UGGG AUCUU   GUG    UA GA U
AC       UC    A           UUA   A   C              -    A     CAC   AUAG  G  U
Stem-loop sequence CUAUCACCAUCAGCUGACCUUUGUUUACCCCAUGCGAAAAGUCUAUUUUUACCCCUAGAAUAUAUGAAAUGCUUCUUAGGAUGAUAGUGCACUUCUAAGGGUAAAAUAGACUUUUUCCAUAGGGAUUAACGGAGGUCAACUGACUGUGAUGGCA