ncRNA ID | novel_osa_miR3015 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:17189194-17189242 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040383 |
Length | 24 |
Mature sequence(if miRNA) | 26 - CUCACUGACAUGUAGACCCGAGGG - 49 |
Stem-loop(if miRNA) |
--            UA A    --A G   CUCACUGACAUG  G CCCG   G G   ||||||||||||  | ||||   |   GAGUGACUGUAC  C GGGU   C G AC            -- -    GUA A |
Stem-loop sequence | CUCACUGACAUGUAGACCCGAGGGGACAUGUGGGCCAUGUCAGUGAGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288806.1 |
|
3.0 | Oryza sativa Japonica Group cDNA, clone: J090071K16, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AB013449.2 |
|
2.0 | Oryza sativa Japonica Group mRNA for Pib, complete cds | NA | coding protein | psRNATarget |