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BaseInfo

ncRNA ID novel_osa_miR3015
Species Oryza sativa
Class miRNA
Genome position Chr9:17189194-17189242 [-]
Reference genome IRGSP-1.0
Source SRR2040383
Length 24
Mature sequence(if miRNA) 26 - CUCACUGACAUGUAGACCCGAGGG - 49
Stem-loop(if miRNA) --            UA A    --A G
  CUCACUGACAUG  G CCCG   G G
  ||||||||||||  | ||||   |
  GAGUGACUGUAC  C GGGU   C G
AC            -- -    GUA A
Stem-loop sequence CUCACUGACAUGUAGACCCGAGGGGACAUGUGGGCCAUGUCAGUGAGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288806.1
ncRNA:24   GGGAGCCCAGAUGUACAGUCACUC   1
  =|*||||**||||||||||||||*
targets:2776   UCAUCGGACCUACAUGUCAGUGAC   2799

3.0 Oryza sativa Japonica Group cDNA, clone: J090071K16, full insert sequence NA coding protein psRNATarget
AB013449.2
ncRNA:24   GGGAGCCCAGAUGUACAGUCACUC   1
  |=*|*|||*|*|||||||||||||
targets:4156   CUGUGGGGCCCACAUGUCAGUGAG   4179

2.0 Oryza sativa Japonica Group mRNA for Pib, complete cds NA coding protein psRNATarget