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BaseInfo

ncRNA ID novel_osa_miR3011
Species Oryza sativa
Class miRNA
Genome position Chr9:11040984-11041057 [+]
Reference genome IRGSP-1.0
Source SRR2040383;SRR2040387;SRR2040400;SRR1612404
Length 22
Mature sequence(if miRNA) 1 - UUAAUGAAUCUAGACAUAUAUU - 22
Stem-loop(if miRNA) --                     UUA    --   GUU
  UUAAUGAAUCUAGACAUAUAU   UAUU  GAU   A
  |||||||||||||||||||||   ||||  |||
  AAUUACUUAGAUCUGUAUAUA   AUAG  CUA   A
AC                     UAG    AU   AGU
Stem-loop sequence UUAAUGAAUCUAGACAUAUAUUUAUAUUGAUGUUAAUGAAUCUAGAUAGAUAUAUAUGUCUAGAUUCAUUAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015789040.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  ||||||||||||||||||||||
targets:4808   AAUAUAUGUCUAGAUUCAUUAA   4829

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266525 (LOC9266525), transcript variant X1, mRNA uncharacterized LOC9266525(LOC9266525) coding protein psRNATarget
AK121342.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  ||||||||||||||||||||||
targets:4642   AAUAUAUGUCUAGAUUCAUUAA   4663

0.0 Oryza sativa Japonica Group cDNA clone:J023121A11, full insert sequence NA coding protein psRNATarget
XM_015765624.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  |||||||||||||||||||||=
targets:1186   AAUAUAUGUCUAGAUUCAUUAG   1207

1.0 PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324918), mRNA probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324918) coding protein psRNATarget
AK241345.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  |||||||||||||||||||||=
targets:1179   AAUAUAUGUCUAGAUUCAUUAG   1200

1.0 Oryza sativa Japonica Group cDNA, clone: J065148C06, full insert sequence NA coding protein psRNATarget
XM_015791317.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:4490   UAUAUAUGUCUAGAUUCAUUAA   4511

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342778 (LOC4342778), transcript variant X1, mRNA uncharacterized LOC4342778(Os07g0231700) coding protein psRNATarget
AK288568.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1434   CAUAUAUGUCUAGAUUCAUUAA   1455

0.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
AK288568.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:2833   UAUAUAUGUCUAGAUUCAUUAG   2854

1.0 Oryza sativa Japonica Group cDNA, clone: J090048B06, full insert sequence NA coding protein psRNATarget
XM_015780916.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:4790   UAUAUAUGUCUAGAUUCAUUAA   4811

0.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X1, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780918.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:4781   UAUAUAUGUCUAGAUUCAUUAA   4802

0.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X3, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015780917.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:4732   UAUAUAUGUCUAGAUUCAUUAA   4753

0.0 PREDICTED: Oryza sativa Japonica Group DExH-box ATP-dependent RNA helicase DExH7, chloroplastic (LOC9267691), transcript variant X2, mRNA DExH-box ATP-dependent RNA helicase DExH7, chloroplastic(LOC9267691) coding protein psRNATarget
XM_015764779.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:4449   UAUAUAUGUCUAGAUUCAUUAA   4470

0.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X4, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
AK067512.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:2326   UAUAUAUGUCUAGAUUCAUUAA   2347

0.0 Oryza sativa Japonica Group cDNA clone:J013109G08, full insert sequence NA coding protein psRNATarget
AK288214.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:2662   UAUAUAUGUCUAGAUUCAUUAA   2683

0.0 Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence NA coding protein psRNATarget
XM_015764777.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:3615   UAUAUAUGUCUAGAUUCAUUAA   3636

0.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X2, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015787712.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:584   UAUAUAUGUCUAGAUUCAUUAA   605

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X4, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015755177.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1802   CAUAUAUGUCUAGAUUCAUUAA   1823

0.0 PREDICTED: Oryza sativa Japonica Group glutathione S-transferase T3 (LOC4346703), transcript variant X1, mRNA glutathione S-transferase T3(LOC4346703) coding protein psRNATarget
AK070890.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:960   UAUAUAUGUCUAGAUUCAUUAA   981

0.0 Oryza sativa Japonica Group cDNA clone:J023069D18, full insert sequence NA coding protein psRNATarget
AK288796.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:833   UAUAUAUGUCUAGAUUCAUUAA   854

0.0 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
XM_015787709.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:584   UAUAUAUGUCUAGAUUCAUUAA   605

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340081 (LOC4340081), transcript variant X1, mRNA uncharacterized LOC4340081(Os06g0142000) coding protein psRNATarget
XM_015764776.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:3379   UAUAUAUGUCUAGAUUCAUUAA   3400

0.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X1, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
XM_015764778.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:3374   UAUAUAUGUCUAGAUUCAUUAA   3395

0.0 PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4352543), transcript variant X3, mRNA putative disease resistance RPP13-like protein 3(LOC4352543) coding protein psRNATarget
AK288872.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1828   UAUAUAUGUCUAGAUUCAUUAA   1849

0.0 Oryza sativa Japonica Group cDNA, clone: J090078I05, full insert sequence NA coding protein psRNATarget
AK288472.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1467   UAUAUAUGUCUAGAUUCAUUAA   1488

0.0 Oryza sativa Japonica Group cDNA, clone: J090037K20, full insert sequence NA coding protein psRNATarget
XM_015759228.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:2139   UAUAUAUGUCUAGAUUCAUUAA   2160

0.0 PREDICTED: Oryza sativa Japonica Group MLO-like protein 9 (LOC4349258), mRNA MLO-like protein 9(LOC4349258) coding protein psRNATarget
AK072272.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1879   UAUAUAUGUCUAGAUUCAUUAA   1900

0.0 Oryza sativa Japonica Group cDNA clone:J023004C21, full insert sequence NA coding protein psRNATarget
AK121202.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1585   UAUAUAUGUCUAGAUUCAUUAA   1606

0.0 Oryza sativa Japonica Group cDNA clone:J023087K24, full insert sequence NA coding protein psRNATarget
XM_015764593.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1585   UAUAUAUGUCUAGAUUCAUUAA   1606

0.0 PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 91C1 (LOC4352520), mRNA UDP-glycosyltransferase 91C1(LOC4352520) coding protein psRNATarget
AK060965.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1585   UAUAUAUGUCUAGAUUCAUUAA   1606

0.0 Oryza sativa Japonica Group cDNA clone:006-202-B11, full insert sequence NA coding protein psRNATarget
XM_015777008.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1418   CAUAUAUGUCUAGAUUCAUUAA   1439

0.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4331744 (LOC4331744), mRNA uncharacterized LOC4331744(LOC4331744) coding protein psRNATarget
CT833624.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1092   CAUAUAUGUCUAGAUUCAUUAA   1113

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN046D04, full insert sequence NA coding protein psRNATarget
AK069402.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1220   UAUAUAUGUCUAGAUUCAUUAA   1241

0.0 Oryza sativa Japonica Group cDNA clone:J023011C17, full insert sequence NA coding protein psRNATarget
CT837490.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:889   UAUAUAUGUCUAGAUUCAUUAA   910

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F07, full insert sequence NA coding protein psRNATarget
XM_015795948.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:1057   CAUAUAUGUCUAGAUUCAUUAA   1078

0.0 PREDICTED: Oryza sativa Japonica Group 60S ribosomal protein L18a-like protein (LOC4326318), mRNA 60S ribosomal protein L18a-like protein(LOC4326318) coding protein psRNATarget
CT837804.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:920   CAUAUAUGUCUAGAUUCAUUAA   941

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA115N24, full insert sequence NA coding protein psRNATarget
AK287948.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:907   CAUAUAUGUCUAGAUUCAUUAA   928

0.0 Oryza sativa Japonica Group cDNA, clone: J075028D01, full insert sequence NA coding protein psRNATarget
AK240884.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:470   UAUAUAUGUCUAGAUUCAUUAA   491

0.0 Oryza sativa Japonica Group cDNA, clone: J065028F04, full insert sequence NA coding protein psRNATarget
CT835159.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||||
targets:258   UAUAUAUGUCUAGAUUCAUUAA   279

0.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI015J24, full insert sequence NA coding protein psRNATarget
XM_015769168.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:2725   CAUAUAUGUCUAGAUUCAUUAG   2746

1.0 PREDICTED: Oryza sativa Japonica Group probable splicing factor 3A subunit 1 (LOC4328860), transcript variant X3, mRNA probable splicing factor 3A subunit 1(LOC4328860) coding protein psRNATarget
AK288833.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||=||||||||||
targets:6   CAUAUAUGUCUGGAUUCAUUAA   27

1.5 Oryza sativa Japonica Group cDNA, clone: J090074A01, full insert sequence NA coding protein psRNATarget
XM_015767450.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1410   UAUAUAUGUCUAGAUUCAUUAG   1431

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X1, mRNA uncharacterized LOC4328324(LOC4328324) coding protein psRNATarget
XM_015767451.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1410   UAUAUAUGUCUAGAUUCAUUAG   1431

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4328324 (LOC4328324), transcript variant X2, mRNA uncharacterized LOC4328324(LOC4328324) coding protein psRNATarget
AK068770.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1654   UAUAUAUGUCUAGAUUCAUUAG   1675

1.0 Oryza sativa Japonica Group cDNA clone:J013169P07, full insert sequence NA coding protein psRNATarget
XM_015781389.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||=||||||||||||
targets:797   UAUAUAUGUUUAGAUUCAUUAA   818

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X1, mRNA uncharacterized LOC4336685(LOC4336685) coding protein psRNATarget
XM_015781390.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||=||||||||||||
targets:797   UAUAUAUGUUUAGAUUCAUUAA   818

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336685 (LOC4336685), transcript variant X2, mRNA uncharacterized LOC4336685(LOC4336685) coding protein psRNATarget
XM_015793334.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1785   UAUAUAUGUCUAGAUUCAUUAG   1806

1.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X1, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
XM_015793335.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1767   UAUAUAUGUCUAGAUUCAUUAG   1788

1.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X2, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
XM_015793336.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1614   UAUAUAUGUCUAGAUUCAUUAG   1635

1.0 PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X3, mRNA transcription factor bHLH112(LOC9271688) coding protein psRNATarget
AK069041.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:2199   UAUAUAUGUCUAGAUUCAUUAG   2220

1.0 Oryza sativa Japonica Group cDNA clone:J023004J15, full insert sequence NA coding protein psRNATarget
XM_015758389.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||=||||
targets:2178   UAUAUAUGUCUAGAUUCGUUAA   2199

1.5 PREDICTED: Oryza sativa Japonica Group protein NRT1/ PTR FAMILY 8.3-like (LOC107276819), mRNA protein NRT1/ PTR FAMILY 8.3-like(LOC107276819) coding protein psRNATarget
XM_015774902.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=|||||
targets:2062   UAUAUAUGUCUAGAUUUAUUAA   2083

1.5 PREDICTED: Oryza sativa Japonica Group beclin-1-like protein (LOC4333557), mRNA beclin-1-like protein(LOC4333557) coding protein psRNATarget
AK099664.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=|||||
targets:2003   UAUAUAUGUCUAGAUUUAUUAA   2024

1.5 Oryza sativa Japonica Group cDNA clone:J013066P07, full insert sequence NA coding protein psRNATarget
AK066359.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=|||||
targets:2003   UAUAUAUGUCUAGAUUUAUUAA   2024

1.5 Oryza sativa Japonica Group cDNA clone:J013066O06, full insert sequence NA coding protein psRNATarget
AK107207.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=|||||
targets:502   CAUAUAUGUCUAGAUUUAUUAA   523

1.5 Oryza sativa Japonica Group cDNA clone:002-125-B10, full insert sequence NA coding protein psRNATarget
XM_015763894.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1944   UAUAUAUGUCUAGAUUCAUUAG   1965

1.0 PREDICTED: Oryza sativa Japonica Group ureide permease 2 (LOC4352286), mRNA ureide permease 2(LOC4352286) coding protein psRNATarget
AK069916.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1930   UAUAUAUGUCUAGAUUCAUUAG   1951

1.0 Oryza sativa Japonica Group cDNA clone:J023038C16, full insert sequence NA coding protein psRNATarget
AK064965.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=|||||
targets:1686   UAUAUAUGUCUAGAUUUAUUAA   1707

1.5 Oryza sativa Japonica Group cDNA clone:J013001B01, full insert sequence NA coding protein psRNATarget
CT832555.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:1403   UAUAUAUGUCUAGAUUCAUUAG   1424

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA110J22, full insert sequence NA coding protein psRNATarget
XM_015769449.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||=||||||||||||||||||
targets:135   UAUGUAUGUCUAGAUUCAUUAA   156

1.0 PREDICTED: Oryza sativa Japonica Group ethylene-responsive transcription factor ERF018-like (LOC107278604), mRNA ethylene-responsive transcription factor ERF018-like(LOC107278604) coding protein psRNATarget
XM_015755201.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||=||||||||||||||||
targets:1130   UAUAUGUGUCUAGAUUCAUUAA   1151

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X2, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
XM_015755199.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||=||||||||||||||||
targets:1127   UAUAUGUGUCUAGAUUCAUUAA   1148

1.0 PREDICTED: Oryza sativa Japonica Group cinnamoyl-CoA reductase 1 (LOC9270429), transcript variant X1, mRNA cinnamoyl-CoA reductase 1(LOC9270429) coding protein psRNATarget
CT834624.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||=||||||||||||
targets:1134   UAUAUAUGUUUAGAUUCAUUAA   1155

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA040F18, full insert sequence NA coding protein psRNATarget
CT828736.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||=
targets:795   UAUAUAUGUCUAGAUUCAUUAG   816

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA125N05, full insert sequence NA coding protein psRNATarget
XM_015778351.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||=||||||||||||||||
targets:689   CAUAUGUGUCUAGAUUCAUUAA   710

1.0 PREDICTED: Oryza sativa Japonica Group UPF0426 protein At1g28150, chloroplastic (LOC4336466), transcript variant X3, mRNA UPF0426 protein At1g28150, chloroplastic(LOC4336466) coding protein psRNATarget
CT831392.1
ncRNA:22   UUAU--AUACAGAUCUAAGUAAUU   1
  ||||--||||||||||||||||||
targets:462   AAUACAUAUGUCUAGAUUCAUUAA   485

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035F20, full insert sequence NA coding protein psRNATarget
AK065957.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||=||||||||||||||||
targets:631   CAUAUGUGUCUAGAUUCAUUAA   652

1.0 Oryza sativa Japonica Group cDNA clone:J013044D08, full insert sequence NA coding protein psRNATarget
AK240780.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||||*
targets:953   UAUAUAUGUCUAGAUUCAUUAU   974

1.0 Oryza sativa Japonica Group cDNA, clone: J053075H13, full insert sequence NA coding protein psRNATarget
AK070155.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||=|||||||||=
targets:1404   UAUAUAUGUCUGGAUUCAUUAG   1425

2.5 Oryza sativa Japonica Group cDNA clone:J023047M11, full insert sequence NA coding protein psRNATarget
XM_015785143.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||=|=||||||||||||||||
targets:1769   UAUGUGUGUCUAGAUUCAUUAA   1790

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9266451 (LOC9266451), mRNA uncharacterized LOC9266451(LOC9266451) coding protein psRNATarget
AK119344.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||=|||=||||||||||||
targets:1216   CAUAUGUGUUUAGAUUCAUUAA   1237

2.5 Oryza sativa Japonica Group cDNA clone:001-131-E01, full insert sequence NA coding protein psRNATarget
AK106777.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||=|=||||||||||||||||
targets:1341   UAUGUGUGUCUAGAUUCAUUAA   1362

2.0 Oryza sativa Japonica Group cDNA clone:002-115-G12, full insert sequence NA coding protein psRNATarget
CT836499.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||=||||=
targets:530   UAUAUAUGUCUAGAUUUAUUAG   551

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA014C07, full insert sequence NA coding protein psRNATarget
XM_015794357.1
ncRNA:22   UUAUAUA-CAGAUCUAAGUAAUU   1
  *||||||-|||||||||||||||
targets:1366   UAUAUAUUGUCUAGAUUCAUUAA   1388

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327949 (LOC4327949), mRNA uncharacterized LOC4327949(LOC4327949) coding protein psRNATarget
AK072517.1
ncRNA:22   UUAU--AUACAGAUCUAAGUAAUU   1
  *|||--||||||||||||||||||
targets:1373   CAUACAUAUGUCUAGAUUCAUUAA   1396

2.5 Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence NA coding protein psRNATarget
AK065332.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  **|||||||||||||||=||||
targets:900   CUUAUAUGUCUAGAUUCGUUAA   921

1.5 Oryza sativa Japonica Group cDNA clone:J013000K10, full insert sequence NA coding protein psRNATarget
CT832958.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  **|||||||||||||||=||||
targets:897   CUUAUAUGUCUAGAUUCGUUAA   918

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA109F21, full insert sequence NA coding protein psRNATarget
AK099933.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|*|||||||||||||||||||
targets:405   CACAUAUGUCUAGAUUCAUUAA   426

0.0 Oryza sativa Japonica Group cDNA clone:J013119E02, full insert sequence NA coding protein psRNATarget
XM_015755249.1
ncRNA:22   UUAUA--UACAGAUCUAAGUAAUU   1
  *||||--|||||||||||||||||
targets:784   UAUAUUCAUGUCUAGAUUCAUUAA   807

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4347372 (LOC4347372), mRNA uncharacterized LOC4347372(LOC4347372) coding protein psRNATarget
AK289050.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*|||||||||
targets:4421   UAUAUAUGUCUAAAUUCAUUAA   4442

1.5 Oryza sativa Japonica Group cDNA, clone: J090092O13, full insert sequence NA coding protein psRNATarget
AK067363.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*|||||||||
targets:1015   CAUAUAUGUCUACAUUCAUUAA   1036

1.5 Oryza sativa Japonica Group cDNA clone:J013100G02, full insert sequence NA coding protein psRNATarget
AK288786.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *=||||||||||||||=||||=
targets:3717   UGUAUAUGUCUAGAUUUAUUAG   3738

2.5 Oryza sativa Japonica Group cDNA, clone: J090069L01, full insert sequence NA coding protein psRNATarget
XM_015766247.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*||||||||||||||
targets:2547   CAUAUAUAUCUAGAUUCAUUAA   2568

1.0 PREDICTED: Oryza sativa Japonica Group putative receptor protein kinase ZmPK1 (LOC107277300), mRNA putative receptor protein kinase ZmPK1(LOC107277300) coding protein psRNATarget
AK072999.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *=|||=|||=||||||||||||
targets:1585   UGUAUGUGUUUAGAUUCAUUAA   1606

2.5 Oryza sativa Japonica Group cDNA clone:J023149N01, full insert sequence NA coding protein psRNATarget
CT831791.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||||||||||||||*||
targets:1812   UAUAUAUGUCUAGAUUCAUCAA   1833

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI241K23, full insert sequence NA coding protein psRNATarget
AK288284.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *=|||=|||=||||||||||||
targets:26   UGUAUGUGUUUAGAUUCAUUAA   47

2.5 Oryza sativa Japonica Group cDNA, clone: J090018D15, full insert sequence NA coding protein psRNATarget
AK099623.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*||||||||||||||
targets:137   UAUAUAUAUCUAGAUUCAUUAA   158

1.0 Oryza sativa Japonica Group cDNA clone:J013053G12, full insert sequence NA coding protein psRNATarget
AK100993.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||||||*|
targets:1213   CAUAUAUGUCUAGAUUCAUUUA   1234

1.5 Oryza sativa Japonica Group cDNA clone:J023146F15, full insert sequence NA coding protein psRNATarget
CT837593.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||*|||||||||||||
targets:143   UAUAUAUGCCUAGAUUCAUUAA   164

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122C23, full insert sequence NA coding protein psRNATarget
XM_015795868.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *=|||=|||=||||||||||||
targets:1213   UGUAUGUGUUUAGAUUCAUUAA   1234

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277671 (LOC107277671), mRNA uncharacterized LOC107277671(LOC107277671) coding protein psRNATarget
XM_015763560.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*|||||||||
targets:1036   UAUAUAUGUCUAAAUUCAUUAA   1057

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278415 (LOC107278415), mRNA uncharacterized LOC107278415(LOC107278415) coding protein psRNATarget
AK241537.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||*|||||||||||||
targets:875   CAUAUAUGCCUAGAUUCAUUAA   896

1.0 Oryza sativa Japonica Group cDNA, clone: J065173J04, full insert sequence NA coding protein psRNATarget
CT836330.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||*|||||||||||||
targets:873   CAUAUAUGCCUAGAUUCAUUAA   894

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN072K19, full insert sequence NA coding protein psRNATarget
AK242637.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||||||*|||||
targets:649   CAUAUAUGUCUAGAUUAAUUAA   670

1.5 Oryza sativa Japonica Group cDNA, clone: J090023H18, full insert sequence NA coding protein psRNATarget
CT829098.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*||||||||||||||
targets:774   UAUAUAUAUCUAGAUUCAUUAA   795

1.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI025D23, full insert sequence NA coding protein psRNATarget
BT131987.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||*|||||||||||||||||=
targets:1   UAUNUAUGUCUAGAUUCAUUAG   22

2.0 Oryza sativa clone RRlibB00014 mRNA sequence NA coding protein psRNATarget
AK102104.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*|||||||||=||||
targets:693   UAUAUAUAUCUAGAUUCGUUAA   714

2.5 Oryza sativa Japonica Group cDNA clone:J033084B10, full insert sequence NA coding protein psRNATarget
AK070816.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *=|=|=|||||||||||||||=
targets:1324   UGUGUGUGUCUAGAUUCAUUAG   1345

3.0 Oryza sativa Japonica Group cDNA clone:J023066M01, full insert sequence NA coding protein psRNATarget
AK067404.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*|||||||||=||||
targets:691   UAUAUAUAUCUAGAUUCGUUAA   712

2.5 Oryza sativa Japonica Group cDNA clone:J013106F19, full insert sequence NA coding protein psRNATarget
AK242868.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*|=||||||||||||
targets:1769   UAUAUAUUUUUAGAUUCAUUAA   1790

2.5 Oryza sativa Japonica Group cDNA, clone: J090076F12, full insert sequence NA coding protein psRNATarget
CT831361.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*|=||||||||||||
targets:2012   UAUAUAUAUUUAGAUUCAUUAA   2033

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI207J06, full insert sequence NA coding protein psRNATarget
XM_015758813.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*||||||||=
targets:1604   UAUAUAUGUCUAUAUUCAUUAG   1625

2.5 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X2, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
XM_015758812.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*||||||||=
targets:1431   UAUAUAUGUCUAUAUUCAUUAG   1452

2.5 PREDICTED: Oryza sativa Japonica Group protein NEN1 (LOC9268899), transcript variant X1, mRNA protein NEN1(LOC9268899) coding protein psRNATarget
AK243498.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *|||||||||||*||||||||=
targets:1438   UAUAUAUGUCUAUAUUCAUUAG   1459

2.5 Oryza sativa Japonica Group cDNA, clone: J100074F07, full insert sequence NA coding protein psRNATarget
AK288390.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  |||=|*|*||||||||||||||
targets:715   AAUGUCUAUCUAGAUUCAUUAA   736

3.0 Oryza sativa Japonica Group cDNA, clone: J090027G18, full insert sequence NA coding protein psRNATarget
AK240854.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  |*||||||||||*||||||||=
targets:3579   ACUAUAUGUCUAAAUUCAUUAG   3600

2.5 Oryza sativa Japonica Group cDNA, clone: J065021E17, full insert sequence NA coding protein psRNATarget
XM_015778501.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  |*||||||||||*||||||||=
targets:1797   ACUAUAUGUCUAAAUUCAUUAG   1818

2.5 PREDICTED: Oryza sativa Japonica Group putative amidase ARB_02965 (LOC4335106), mRNA putative amidase ARB_02965(LOC4335106) coding protein psRNATarget
AK288952.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||*|*||||||||||||||
targets:282   CAUAUCUAUCUAGAUUCAUUAA   303

2.0 Oryza sativa Japonica Group cDNA, clone: J090083K12, full insert sequence NA coding protein psRNATarget
AK072622.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  **|||||*||||||||=|||||
targets:440   UUUAUAUAUCUAGAUUUAUUAA   461

2.5 Oryza sativa Japonica Group cDNA clone:J023125G21, full insert sequence NA coding protein psRNATarget
XM_015761840.1
ncRNA:22   UUAUAUACAGAUCUAAGUAAUU   1
  *||||||*||||||||||*|||
targets:2025   CAUAUAUAUCUAGAUUCAAUAA   2046

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350579 (LOC4350579), mRNA uncharacterized LOC4350579(LOC4350579) coding protein psRNATarget
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