ncRNA ID | novel_osa_miR3007 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:14265682-14265799 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040383 |
Length | 24 |
Mature sequence(if miRNA) | 95 - CUUAAUAGAUUCAUGUCGUAGUUU - 118 |
Stem-loop(if miRNA) |
--              G            GA A                AUUAAACGUA   CUUAAUAGAUUCAU UCGUAGUUUACA  C GAAUCUGUAAUUUGUU          G   |||||||||||||| ||||||||||||  | ||||||||||||||||   GAAUUAUCUAAGUA AGCAUCAAAUGU  G CUUAGAUAUUAAACAA          A CC              G            UC C                AACAAUAAUC |
Stem-loop sequence | CUUAAUAGAUUCAUGUCGUAGUUUACAGACAGAAUCUGUAAUUUGUUAUUAAACGUAGACUAAUAACAAAACAAAUUAUAGAUUCCGCUUGUAAACUACGAGAUGAAUCUAUUAAGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK102033.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:J033081B10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288192.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090007C12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK072891.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023147C03, full insert sequence | NA | coding protein | psRNATarget |