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BaseInfo

ncRNA ID	novel_osa_miR3004
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:2263568-2263688 [+]
Reference genome	IRGSP-1.0
Source	SRR2040383
Length	24
Mature sequence(if miRNA)	1 - GACCAAAUUUAACUUUUACAAGUU - 24
Stem-loop(if miRNA)	--GACC                     C        G       UAAA   AA    GUU       AAAUUUAACUUUUACAAGUUG AACAAAAA AACAAAU    CUG  AAUA   A       ||||||||||||||||||||| |||||||| |||||||    |||  ||||   U       UUUAAGUUGAAGAUGUUCAAC UUGUUUUU UUGUUUA    GAC  UUGU   C UUCAAA                     A        A       UAUC   GC    AUA
Stem-loop sequence	GACCAAAUUUAACUUUUACAAGUUGCAACAAAAAGAACAAAUUAAACUGAAAAUAGUUAUCAUAUGUUCGCAGCUAUAUUUGUUAUUUUUGUUACAACUUGUAGAAGUUGAAUUUAAACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK243002.1	ncRNA:24   UUGAACAUUUUCAAUUUAAACCAG   1   ||=*||||=|||||||||||*||| targets:2546   AAUCUGUAGAAGUUAAAUUUAGUC   2569 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096D02, full insert sequence	NA	coding protein	psRNATarget
AK289096.1	ncRNA:24   UUGAACAUUUUCAAUUUAAACCAG   1   ||=*||||=|||||||||||*||| targets:2546   AAUCUGUAGAAGUUAAAUUUAGUC   2569 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096D02, full insert sequence	NA	coding protein	psRNATarget
AK288638.1	ncRNA:24   UUGAACAUUUUCAAUUUAAACCAG   1   =|=*||||*|||||*||||||||| targets:2028   GAUAUGUAUAAGUUUAAUUUGGUC   2051 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090055N09, full insert sequence	NA	coding protein	psRNATarget