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BaseInfo

ncRNA ID novel_osa_miR2987
Species Oryza sativa
Class miRNA
Genome position Chr6:3296347-3296514 [+]
Reference genome IRGSP-1.0
Source SRR2040383;SRR2040408;SRR2857729;SRR2857733;SRR3123651;SRR1738240
Length 24
Mature sequence(if miRNA) 1 - UUUUUAUGUCUAACGUUUGACCGU - 24
Stem-loop(if miRNA) ---       GUC   C       C  CCGUCUUAUU   --- UUUUUUUUAUGAUUAGUAUUUUUAUUGUUAUUAGAUGAUAAAACA
   UUUUUAU   UAA GUUUGAC GU          UAA   A                                             U
   |||||||   ||| ||||||| ||          |||   |
   AAAAAUA   GUU CAAACUG CA          ACU   U                                             G
CCA       --A   A       A  ----AAAUAA   UUA AUAUAUAUAUAUAUAAUUUUUUAUUCUGUGCAUAUUUUAUAAUAA
Stem-loop sequence UUUUUAUGUCUAACGUUUGACCGUCCGUCUUAUUUAAAUUUUUUUUAUGAUUAGUAUUUUUAUUGUUAUUAGAUGAUAAAACAUGAAUAAUAUUUUAUACGUGUCUUAUUUUUUAAUAUAUAUAUAUAUAUAUUUCAAAUAAAACAGUCAAACAUUGAAUAAAAAACC