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BaseInfo

ncRNA ID novel_osa_miR2986
Species Oryza sativa
Class miRNA
Genome position Chr6:25062059-25062238 [+]
Reference genome IRGSP-1.0
Source SRR2040383;SRR2040385;SRR2040388;SRR1612403
Length 24
Mature sequence(if miRNA) 157 - AAACGUUAUAAGUAAAAACUCAAA - 180
Stem-loop(if miRNA) --UCAA          C         C                 U       C    AUAAAAAACAAAAAG     -    AAG  C  U
      UUUUUGCUUG AACGUUUGA CACUCGUCUUAUUUAAA UUUUUUG AAAU               UUGUG CUUA   UA UG A
      |||||||||| ||||||||| ||||||||||||||||| ||||||| ||||               ||||| ||||   || ||
      AAAAAUGAAU UUGCAAACU GUGAGCAGAAUAAGUUU AAAAAAC UUUA               AACAC GAAU   AU AU G
AAACUC          A         A                 U       -    AUAAUUAAUAAAAUA     U    GAA  A  A
Stem-loop sequence UCAAUUUUUGCUUGCAACGUUUGACCACUCGUCUUAUUUAAAUUUUUUUGCAAAUAUAAAAAACAAAAAGUUGUGCUUAAAGUACUGUAGAUAAUAAAGUAAGUCACAAAUAAAAUAAUUAAUAAUUUCAAAAAAUUUUGAAUAAGACGAGUGAUCAAACGUUAUAAGUAAAAACUCAAA