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BaseInfo

ncRNA ID novel_osa_miR2978
Species Oryza sativa
Class miRNA
Genome position Chr6:1042967-1043186 [+]
Reference genome IRGSP-1.0
Source SRR1298758;SRR1300837
Length 24
Mature sequence(if miRNA) 1 - AAUUGAGAAGAUGUAUUAACAUGA - 24
Stem-loop(if miRNA) --         G         C   A  UCA                       G            A  U                   A    -------     CAACA  UAG
  AAUUGAGAA AUGUAUUAA AUG GA   UAUAUCACUCUAUAAAUAUGCAA UUCAAAUUCAAC UC AUAUCUCGUAACGAAAAAA CAAA       GUAAA     GC   U
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  UUAAUUCUU UACAUAAUU UAC CU   AUAUAGUGAGGUGUUUGUACGUU AAGUUUAAGUUG AG UGUAGAGCAUUGCUUUUUU GUUU       CAUUU     CG   U
UU         A         A   A  ---                       A            A  -                   -    AAACUGA     --AUA  CAA
Stem-loop sequence AAUUGAGAAGAUGUAUUAACAUGAGAUCAUAUAUCACUCUAUAAAUAUGCAAGUUCAAAUUCAACAUCUAUAUCUCGUAACGAAAAAAACAAAGUAAACAACAGCUAGUUAACGCAUAUUUACAGUCAAAUUUGUUUUUUCGUUACGAGAUGUGAAGUUGAAUUUGAAAUUGCAUGUUUGUGGAGUGAUAUAUCACAUAUUAAUACAUAUUCUUAAUUUU