| ncRNA ID | novel_osa_miR2964 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:16454343-16454540 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR2040383 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - ACGGCGCUGUUGACUUUUGGA - 21 |
| Stem-loop(if miRNA) |
--AC C GUUCA -GGCUA - --UU --U UAUUC UUU AU GGCG UGUUGACUUUUGGAUAUGAUGUUUGACCAUUCGUCU AAAA UGUAAAUAU CA UAU UCAU CUUG UAUC U |||| |||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||| |||| |||| |||| CCGC ACAACUGAAAACCUGUACUGCAAAUUGGUAAGUAGA UUUU ACGUUUAUA GU AUA AGUA GAAU AUGG A UUUA A AUAAA AAAAUC C UUUU UUC ----C UUU AA |
| Stem-loop sequence | ACGGCGCUGUUGACUUUUGGAUAUGAUGUUUGACCAUUCGUCUGUUCAAAAAGGCUAUGUAAAUAUCAUUUAUUUCAUUAUUCCUUGUUUUAUCAUUAAAGGUAUUUUAAGCAUGACUUAUAUUUUUGCAUAUUUGCACUAAAAUUUUAAAUAAGAUGAAUGGUUAAACGUCAUGUCCAAAAGUCAACAACGCCAUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK104325.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:001-027-H10, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK068157.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013134G12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK105984.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:001-205-G04, full insert sequence | NA | coding protein | psRNATarget |