ncRNA ID | novel_osa_miR2963 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:3792933-3793115 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040383;SRR2040405;SRR2097778;SRR2857729;SRR3123630;SRR3123645;SRR1738225;SRR1738226;SRR1460508 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGGAAAACGAUCGAGAAUUGACG - 24 |
Stem-loop(if miRNA) |
--                                          A            CA      UA        C     -UGCCAU  AU   UCAAUUCUCGAUCGUUUUCCGUCCGCCUUAAUCGCUAUUGAC UAGCCACGCACA  AUAUGA  UUUCUACC CUCAU       GG  U   |||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||  |||||||| |||||       ||   AGUUAAGAGCUAGCAAAAGGUAGGCGGAAUUAGCGAUAACUG GUCGGUGCGUGU  UAUACU  AAAGAUGG GAGUG       UC  C GC                                          G            AC      GC        A     UUUAUGU  AU |
Stem-loop sequence | UCAAUUCUCGAUCGUUUUCCGUCCGCCUUAAUCGCUAUUGACAUAGCCACGCACACAAUAUGAUAUUUCUACCCCUCAUUGCCAUGGAUUCUACUUGUAUUUGUGAGAGGUAGAAACGUCAUAUCAUGUGCGUGGCUGGGUCAAUAGCGAUUAAGGCGGAUGGAAAACGAUCGAGAAUUGACG |