| ncRNA ID | novel_osa_miR2955 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:15488407-15488538 [-] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1555747;SRR1556020 |
| Length | 22 |
| Mature sequence(if miRNA) | 1 - AGUAUUCGGGAAGAGCAGGCUC - 22 |
| Stem-loop(if miRNA) |
-- C -- - AGCA GC AU --U -UUG C U CU C GCC UGUUC CUUGAGU UUC UGC UCC CAGU CUAGGGC GG AGCU CAU CC A ||| ||||| ||||||| ||| ||| ||| |||| ||||||| || |||| ||| || CGG ACGAG GGGCUUA GAG ACG AGG GUCA GGUUCUG CC UUGA GUG GG U CU - AA U ---G GA CG UAU UGGA - - AC G |
| Stem-loop sequence | GCCCUGUUCCUUGAGUUUCAGCAUGCGCUCCAUCAGUUCUAGGGCUUGGGCAGCUUCAUCUCCCAUGGGCAGUGAGUUCCAGGUGUCUUGGUAUACUGGCGGAAGGCAGGAGUAUUCGGGAAGAGCAGGCUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015773671.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group cell surface glycoprotein 1-like (LOC107280248), transcript variant X1, mRNA | cell surface glycoprotein 1-like(LOC107280248) | coding protein | psRNATarget |