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BaseInfo

ncRNA ID	novel_osa_miR2951
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:9003342-9003532 [-]
Reference genome	IRGSP-1.0
Source	SRR2040383
Length	24
Mature sequence(if miRNA)	1 - GAGUAGUUUGACUUGGACUAAAGU - 24
Stem-loop(if miRNA)	---UUU      A            A            C C          --UAUU       AC   A    ------------C    UUUCAUUAAAUCU       GUUCAA GUCAAACUACUU AAGUUUGGCUGA U UAUAAAAAAA      AAUAUUU  AAC CCAG             AUAG             A       |||||| |||||||||||| |||||||||||| | ||||||||||      |||||||  ||| ||||             ||||       CAGGUU CAGUUUGAUGAG UUUAAACUGAUU A AUAUUUUUUU      UUAUAAA  UUG GGUU             ACUU             U UGAAAU      -            A            A A          UUCAUC       AA   -    UUGAUUAUAUAAU    UUAAAUAAGUUAA
Stem-loop sequence	UUUGUUCAAAGUCAAACUACUUAAAGUUUGGCUGACUCUAUAAAAAAAUAUUAAUAUUUACAACACCAGCAUAGUUUCAUUAAAUCUAUAAUUGAAUAAAUUUUCAUAAUAUAUUAGUUUUGGGUUAAAAAUAUUCUACUUUUUUUUUAUAAAAUUAGUCAAAUUUAGAGUAGUUUGACUUGGACUAAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288527.1	ncRNA:24   UGAAAUCAGGUUCAGUUUGAUGAG   1   |||||=||=*|||||||||||||| targets:594   ACUUUGGUUAAAGUCAAACUACUC   617 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090044J18, full insert sequence	NA	coding protein	psRNATarget
JB164583.1	ncRNA:24   UGAAAUCAGGUUCAGUUUGAUGAG   1   ||||*=|||*|||||||||||||= targets:20   ACUUGGGUCAAAGUCAAACUACUU   43 Target Full Sequence	3.0	Sequence 2247 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236252.1	ncRNA:24   UGAAAUCAGGUUCAGUUUGAUGAG   1   ||||*=|||*|||||||||||||= targets:20   ACUUGGGUCAAAGUCAAACUACUU   43 Target Full Sequence	3.0	Sequence 2247 from Patent EP2985353	NA	coding protein	psRNATarget
HI404122.1	ncRNA:24   UGAAAUCAGGUUCAGUUUGAUGAG   1   ||||*=|||*|||||||||||||= targets:20   ACUUGGGUCAAAGUCAAACUACUU   43 Target Full Sequence	3.0	Sequence 2247 from Patent EP2074227	NA	coding protein	psRNATarget