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BaseInfo

ncRNA ID novel_osa_miR2923
Species Oryza sativa
Class miRNA
Genome position Chr12:15191230-15191276 [+]
Reference genome IRGSP-1.0
Source SRR2040383
Length 21
Mature sequence(if miRNA) 1 - CCAUUAUCGCAUGCGGCUGUC - 21
Stem-loop(if miRNA) --                    C
  CCAUUAUCGCAUGCGGCUGU C
  |||||||||||||||||||| U
  GGUAAUAGCGUACGCCGACG A
UA                    A
Stem-loop sequence CCAUUAUCGCAUGCGGCUGUCCUAAGCAGCCGCAUGCGAUAAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164734.1
ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1
  |||||||||||||||||||-||
targets:29   GACAGCCGCAUGCGAUAAUAGG   50

3.0 Sequence 2398 from Patent EP2559767 NA coding protein psRNATarget
JB164734.1
ncRNA:21   CUGUCGGCGUACGCUAUUACC   1
  *=|||||||||||||||||||
targets:76   AGCAGCCGCAUGCGAUAAUGG   96

0.0 Sequence 2398 from Patent EP2559767 NA coding protein psRNATarget
HI404273.1
ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1
  |||||||||||||||||||-||
targets:29   GACAGCCGCAUGCGAUAAUAGG   50

3.0 Sequence 2398 from Patent EP2074227 NA coding protein psRNATarget
HI404273.1
ncRNA:21   CUGUCGGCGUACGCUAUUACC   1
  *=|||||||||||||||||||
targets:76   AGCAGCCGCAUGCGAUAAUGG   96

0.0 Sequence 2398 from Patent EP2074227 NA coding protein psRNATarget
LQ236403.1
ncRNA:21   CUGUCGGCGUACGCUAUUA-CC   1
  |||||||||||||||||||-||
targets:29   GACAGCCGCAUGCGAUAAUAGG   50

3.0 Sequence 2398 from Patent EP2985353 NA coding protein psRNATarget
LQ236403.1
ncRNA:21   CUGUCGGCGUACGCUAUUACC   1
  *=|||||||||||||||||||
targets:76   AGCAGCCGCAUGCGAUAAUGG   96

0.0 Sequence 2398 from Patent EP2985353 NA coding protein psRNATarget