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BaseInfo

ncRNA ID novel_osa_miR2915
Species Oryza sativa
Class miRNA
Genome position Chr8:19521360-19521459 [+]
Reference genome IRGSP-1.0
Source SRR2040382;SRR2040385;SRR2040404;SRR2040408
Length 24
Mature sequence(if miRNA) 77 - GAUUAAUGAUUUGUCACUAGGCCU - 100
Stem-loop(if miRNA) --     UUG   U  -        UGAAAU      U A   C G   UUUUA
  GCUUA   GAC AA CGUUGGUU      GCCACU G AAG G GGC     A
  |||||   ||| || ||||||||      |||||| | ||| | |||
  CGGAU   CUG UU GUAAUUAG      UGGUGA C UUC C CCG     C
UC     -CA   U  A        ------      C A   U A   UUUAU
Stem-loop sequence GCUUAUUGGACUAACGUUGGUUUGAAAUGCCACUUGAAAGCGGGGCUUUUAACUAUUUGCCACUCUUACCAGUGGUGAUUAAUGAUUUGUCACUAGGCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015791467.1
ncRNA:24   UCCGGAUCACUGUUUAGUAAUUAG   1
  =*||=|||||=|||||||||||*|
targets:11   GAGCUUAGUGGCAAAUCAUUAAGC   34

2.5 PREDICTED: Oryza sativa Japonica Group synaptotagmin-5 (LOC4342997), mRNA synaptotagmin-5(LOC4342997) coding protein psRNATarget