ncRNA ID | novel_osa_miR2915 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:19521360-19521459 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040382;SRR2040385;SRR2040404;SRR2040408 |
Length | 24 |
Mature sequence(if miRNA) | 77 - GAUUAAUGAUUUGUCACUAGGCCU - 100 |
Stem-loop(if miRNA) |
--     UUG   U  -        UGAAAU      U A   C G   UUUUA   GCUUA   GAC AA CGUUGGUU      GCCACU G AAG G GGC     A   |||||   ||| || ||||||||      |||||| | ||| | |||   CGGAU   CUG UU GUAAUUAG      UGGUGA C UUC C CCG     C UC     -CA   U  A        ------      C A   U A   UUUAU |
Stem-loop sequence | GCUUAUUGGACUAACGUUGGUUUGAAAUGCCACUUGAAAGCGGGGCUUUUAACUAUUUGCCACUCUUACCAGUGGUGAUUAAUGAUUUGUCACUAGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015791467.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group synaptotagmin-5 (LOC4342997), mRNA | synaptotagmin-5(LOC4342997) | coding protein | psRNATarget |