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BaseInfo

ncRNA ID novel_osa_miR2913
Species Oryza sativa
Class miRNA
Genome position Chr8:1459031-1459111 [+]
Reference genome IRGSP-1.0
Source SRR2040382
Length 24
Mature sequence(if miRNA) 58 - AAAUGAUUAUCCCGUGCGGUUGGG - 81
Stem-loop(if miRNA) U               UCGAUUAUCCCGUGCGGUCCACUU
 GACCGCACGGGAUAA                        A
 |||||||||||||||
 GGGUUGGCGUGCCCU                        A
-               AUUAGUAAAAGGGCACGCCAGCCC
Stem-loop sequence UGACCGCACGGGAUAAUCGAUUAUCCCGUGCGGUCCACUUAACCCGACCGCACGGGAAAAUGAUUAUCCCGUGCGGUUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT835681.1
ncRNA:24   GGGUUGGCGUGCCCUAUUAG-UAAA   1
  ====||||||||||||||||-||||
targets:487   UUUGACCGCACGGGAUAAUCCAUUU   511

3.0 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA033C01, full insert sequence NA coding protein psRNATarget