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BaseInfo

ncRNA ID	novel_osa_miR2910
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:28254764-28254987 [-]
Reference genome	IRGSP-1.0
Source	SRR2040382;SRR2040383;SRR2040385;SRR2040386;SRR2040387;SRR2040394;SRR2040401;SRR2040402;SRR2040403;SRR2040409;SRR2040411;SRR2857729;SRR2857730;SRR2857732;SRR2857733;SRR2857734;SRR2857735;SRR3123645;SRR5049781;SRR5049793;SRR1738226;SRR1738227
Length	24
Mature sequence(if miRNA)	1 - AAUCUAUGUUUAAUACUCUAAAUU - 24
Stem-loop(if miRNA)	--    A               C      C                              AU                  U        G     --    GACAAGGUAGUG   UUUG AGUAUUAAACAUAGA UACUUA AAAACUAAUUACACAGAUAGAGGCUAAUUU  UGAGACGAAUCUAUUAAG CUAAUUAG CCAUG  AUUU            G   |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| |||||  ||||            U   AAAU UCAUAAUUUGUAUCU AUGAAU UUUUGAUUAAUGUGUCUAUCUCUGAUUAAA  GCUCUGCUUAGAUAAUUU GAUUAAUU GGUAC  AUCG            A UU    C               A      U                              -C                  U        A     AA    UGUAUAAAUGAC
Stem-loop sequence	UUUGAAGUAUUAAACAUAGACUACUUACAAAACUAAUUACACAGAUAGAGGCUAAUUUAUUGAGACGAAUCUAUUAAGUCUAAUUAGGCCAUGAUUUGACAAGGUAGUGGUACAGUAAAUAUGUGCUAAACAUGGAUUAAUUAGUUUUAAUAGAUUCGUCUCGCAAAUUAGUCUCUAUCUGUGUAAUUAGUUUUUUAAGUAAUCUAUGUUUAAUACUCUAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015781196.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   ||||||||||||||||||||||*| targets:2009   AAUUUAGAGUAUUAAACAUAGACU   2032 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group GATA transcription factor 6 (LOC4336532), mRNA	GATA transcription factor 6(LOC4336532)	coding protein	psRNATarget
AK288948.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   ||||||||||||||||||||||*| targets:2591   AAUUUAGAGUAUUAAACAUAGACU   2614 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090083I09, full insert sequence	NA	coding protein	psRNATarget
AK288241.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   ||||||||||||||||||||||*| targets:529   AAUUUAGAGUAUUAAACAUAGACU   552 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090013L13, full insert sequence	NA	coding protein	psRNATarget
AK100185.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   |||||=||||||||||||||*||| targets:667   AAUUUGGAGUAUUAAACAUACAUU   690 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023031M16, full insert sequence	NA	coding protein	psRNATarget
AK102033.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   |||||=||||||||||||||||*| targets:287   AAUUUGGAGUAUUAAACAUAGACU   310 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033081B10, full insert sequence	NA	coding protein	psRNATarget
AK240978.1	ncRNA:24   UUAAAUCUCAUAAUUUGUAUCUAA   1   ||||-|||||=|||||||||||*| targets:353   AAUU-AGAGUGUUAAACAUAGACU   375 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065048J02, full insert sequence	NA	coding protein	psRNATarget