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BaseInfo

ncRNA ID	novel_osa_miR2901
Species	Oryza sativa
Class	miRNA
Genome position	Chr6:12401205-12401297 [-]
Reference genome	IRGSP-1.0
Source	SRR2040382
Length	21
Mature sequence(if miRNA)	1 - GUAAAGAUCACAAUCAAAGUG - 21
Stem-loop(if miRNA)	--                                        CA  U   CUUUGAUUGUGAUCUUUACCUGAAAAUGAACUUUAUUGUA  UC U   ||||||||||||||||||||||||||||||||||||||||  || A   GAAACUAACACUAGAAAUGGACUUUUACUUGAAAUAACAU  AG C GU                                        --  A
Stem-loop sequence	CUUUGAUUGUGAUCUUUACCUGAAAAUGAACUUUAUUGUACAUCUUACAGAUACAAUAAAGUUCAUUUUCAGGUAAAGAUCACAAUCAAAGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288581.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *|=||||||||||||=||||| targets:4759   GAUUUUGAUUGUGAUUUUUAC   4779 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090049H15, full insert sequence	NA	coding protein	psRNATarget
AK073561.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *||||*||||||||||*|||| targets:2024   AACUUGGAUUGUGAUCAUUAC   2044 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033042D15, full insert sequence	NA	coding protein	psRNATarget
XM_015791321.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *||||*||||||||||*|||| targets:2022   AACUUGGAUUGUGAUCAUUAC   2042 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable cellulose synthase A catalytic subunit 3 [UDP-forming] (LOC4343049), mRNA	probable cellulose synthase A catalytic subunit 3 [UDP-forming](LOC4343049)	coding protein	psRNATarget
AK121193.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *||||*||||||||||*|||| targets:1942   AACUUGGAUUGUGAUCAUUAC   1962 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023086F23, full insert sequence	NA	coding protein	psRNATarget
AK067386.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *||||*||||||||||*|||| targets:1036   AACUUGGAUUGUGAUCAUUAC   1056 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013099F14, full insert sequence	NA	coding protein	psRNATarget
AK120236.1	ncRNA:21   GUGAAACUAACACUAGAAAUG   1   *||||*||||||||||*|||| targets:1946   AACUUGGAUUGUGAUCAUUAC   1966 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013043M21, full insert sequence	NA	coding protein	psRNATarget