ncRNA ID | novel_osa_miR2879 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:18620955-18621128 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040382;SRR2040388;SRR2040391;SRR2040405;SRR2040411 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGAGACAUGUCCAAUACUCCCU - 24 |
Stem-loop(if miRNA) |
--                             C   A              -AA    -AC          ACA        A    CC   AUCGAGACAUGUCCAAUACUCCCUCCGUC UAA AAGAAUCAACCUAG   AGGA   CCCUCCUAGG   AUGUAUGU GACA  C   ||||||||||||||||||||||||||||| ||| ||||||||||||||   ||||   ||||||||||   |||||||| ||||   UGGCUCUGUACAGGUUAUGAGGGAGGUAG GUU UUCUUAGUUGGAUC   UCCU   GGGAGGAUCC   UACAUACA CUGU  C GA                             C   C              CUC    ACU          AAC        C    AU |
Stem-loop sequence | AUCGAGACAUGUCCAAUACUCCCUCCGUCCUAAAAAGAAUCAACCUAGAAAGGAACCCCUCCUAGGACAAUGUAUGUAGACACCCCUAUGUCCACAUACAUCAACCUAGGAGGGUCAUCCUCUCCUAGGUUGAUUCUUCUUGCGAUGGAGGGAGUAUUGGACAUGUCUCGGUAG |