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BaseInfo

ncRNA ID novel_osa_miR2876
Species Oryza sativa
Class miRNA
Genome position Chr3:5990765-5990812 [+]
Reference genome IRGSP-1.0
Source SRR2040382;SRR2040385;SRR2040392;SRR1609316
Length 24
Mature sequence(if miRNA) 25 - GUUGGCGCCGUCCUGUUGAACGAC - 48
Stem-loop(if miRNA) --  -G   G             A
  CG  CAG GGGACGGCGCCAA G
  ||  ||| ||||||||||||| A
  GC  GUU UCCUGCCGCGGUU G
CA  AA   G             G
Stem-loop sequence CGGCAGGGGGACGGCGCCAAAGAGGUUGGCGCCGUCCUGUUGAACGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288284.1
ncRNA:24   CAGCAAGUUGUCCUGCCGCGGUUG   1
  |||*||||||||||||||||=|||
targets:306   GUCAUUCAACAGGACGGCGCUAAC   329

1.5 Oryza sativa Japonica Group cDNA, clone: J090018D15, full insert sequence NA coding protein psRNATarget