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BaseInfo

ncRNA ID	novel_osa_miR2862
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:4750359-4750524 [-]
Reference genome	IRGSP-1.0
Source	SRR2040382
Length	22
Mature sequence(if miRNA)	145 - UUGUUUACAACGUUUGACCACU - 166
Stem-loop(if miRNA)	--UUGUUUA                           AA       -    UAUUAUUUAUUUUAU     A    CUU     U          CAACGUUUGACCACUCGUCUUAUUUAA  UUUUUUG AAAU               UUGUG CUUA   UAUUA C          |||||||||||||||||||||||||||  ||||||| ||||               ||||| ||||   |||||          GUUGUAAACUGGUGAGCAGAAUAAAUU  AAAAAAC UUUA               AACAC GAAU   AUAAU U AAAAAGAAC                           AA       G    UAUUUUUUAUUUUUC     -    UUC     A
Stem-loop sequence	UUGUUUACAACGUUUGACCACUCGUCUUAUUUAAAAUUUUUUGAAAUUAUUAUUUAUUUUAUUUGUGACUUACUUUAUUAUCUAUAAUACUUUAAGCACAACUUUUUAUUUUUUAUAUUUGCAAAAAAAAUUAAAUAAGACGAGUGGUCAAAUGUUGCAAGAAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015767620.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   ||||||||||||||||||=||| targets:1974   AGUGGUCAAACGUUGUAAGCAA   1995 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4324862 (LOC4324862), mRNA	uncharacterized LOC4324862(LOC4324862)	coding protein	psRNATarget
AK289081.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   ||||||||||||||||||=||| targets:2988   AGUGGUCAAACGUUGUAAGCAA   3009 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090095E02, full insert sequence	NA	coding protein	psRNATarget
XM_015767968.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   |||*||||||||||||||=||| targets:1583   AGUAGUCAAACGUUGUAAGCAA   1604 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group altered inheritance rate of mitochondria protein 25 (LOC4328840), mRNA	altered inheritance rate of mitochondria protein 25(LOC4328840)	coding protein	psRNATarget
AK064477.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   |*|||||||||||||||*|||| targets:80   AAUGGUCAAACGUUGUACACAA   101 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-111-A02, full insert sequence	NA	coding protein	psRNATarget
AK072517.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   |*|||||||||||||||*|||| targets:1809   AAUGGUCAAACGUUGUACACAA   1830 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023133J02, full insert sequence	NA	coding protein	psRNATarget
AK288606.1	ncRNA:22   UCACCAGUUUGCAACAUUUGUU   1   =***|||||||||||||*|||| targets:2492   GACAGUCAAACGUUGUACACAA   2513 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090052P16, full insert sequence	NA	coding protein	psRNATarget