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BaseInfo

ncRNA ID novel_osa_miR2859
Species Oryza sativa
Class miRNA
Genome position Chr1:37144651-37144728 [-]
Reference genome IRGSP-1.0
Source SRR2040382;SRR2040389;SRR2040400;SRR2040402;SRR2040405;SRR3123648;SRR5351737;SRR5351738;SRR1738235
Length 24
Mature sequence(if miRNA) 1 - AUCGACUGAUACCUGGUACCCUGG - 24
Stem-loop(if miRNA) --CU       UG      G  C                 
    GGUACCA  GGUAUU AG UGAUACCUAGGUAUCAGG
    |||||||  |||||| || |||||||||||||||||C
    CCAUGGU  CCAUAG UC GCUAUGGGUCCAUGGUUC
GGUC       --      -  A                 
Stem-loop sequence CUGGUACCAUGGGUAUUGAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUGGGUAUCGACUGAUACCUGGUACCCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107372.1
ncRNA:24   GGUCCCAUGGUCCAUAGUCAGCUA   1
  ||||||||||||||||||||||||
targets:566   CCAGGGUACCAGGUAUCAGUCGAU   589

0.0 Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence NA coding protein psRNATarget
AK107372.1
ncRNA:24   GGUCCCAUGGUCCAUAGUCAGCUA   1
  ||||||||||||||||||||||||
targets:703   CCAGGGUACCAGGUAUCAGUCGAU   726

0.0 Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence NA coding protein psRNATarget