ncRNA ID | novel_osa_miR2859 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:37144651-37144728 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040382;SRR2040389;SRR2040400;SRR2040402;SRR2040405;SRR3123648;SRR5351737;SRR5351738;SRR1738235 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGACUGAUACCUGGUACCCUGG - 24 |
Stem-loop(if miRNA) |
--CU       UG      G  C                      GGUACCA  GGUAUU AG UGAUACCUAGGUAUCAGG     |||||||  |||||| || |||||||||||||||||C     CCAUGGU  CCAUAG UC GCUAUGGGUCCAUGGUUC GGUC       --      -  A                  |
Stem-loop sequence | CUGGUACCAUGGGUAUUGAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUGGGUAUCGACUGAUACCUGGUACCCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107372.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107372.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence | NA | coding protein | psRNATarget |