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BaseInfo

ncRNA ID	novel_osa_miR2858
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:39654435-39654531 [-]
Reference genome	IRGSP-1.0
Source	SRR2040382;SRR2040384;SRR2040385;SRR2040386;SRR2040387;SRR2040389;SRR2040390;SRR2040391;SRR2040398;SRR2040399;SRR2040401;SRR2040402;SRR2040403;SRR2040405;SRR2040408;SRR2040410;SRR2040411;SRR2857732;SRR2857733;SRR1612403
Length	24
Mature sequence(if miRNA)	1 - AAAAAUUGACGGAAGUAGUCGCCU - 24
Stem-loop(if miRNA)	U C    C  GAAUUUUUUUAUU  U     UUUUUAUUAAAAGUUUUA GGGC G CUAC UC             UA AAUUU                  C |||| | |||| ||             || |||||                  A UCCG C GAUG AG             GU UAAAA                  A     - U    A  ----------GCA  -     AUUUUACCUUUUAAUAAA
Stem-loop sequence	GGGCUGCCUACCUCGAAUUUUUUUAUUUAUAAUUUUUUUUAUUAAAAGUUUUACAAAAAUAAUUUUCCAUUUUAAAAAUUGACGGAAGUAGUCGCCU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288687.1	ncRNA:24   UCCGCUGAUGAAGGCAGUUAAAAA   1   |||||||||||||||||||||||* targets:1780   AGGCGACUACUUCCGUCAAUUUUC   1803 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090060E09, full insert sequence	NA	coding protein	psRNATarget
AK289004.1	ncRNA:24   UCCGCUGAUGAAGGCAGUUAAAAA   1   =||||||||||||=|||||||||| targets:3634   GGGCGACUACUUCUGUCAAUUUUU   3657 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090088N21, full insert sequence	NA	coding protein	psRNATarget
AK242256.1	ncRNA:24   UCCGCUGAUGAAGGCAGUUAAAAA   1   ||||||||||||||||=||||||* targets:734   AGGCGACUACUUCCGUUAAUUUUC   757 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J075183D10, full insert sequence	NA	coding protein	psRNATarget
AK288720.1	ncRNA:24   UCC-GCUGAUGAAGGCAGUUAAAAA   1   *||-||||||||||=|||||||||| targets:1401   CGGACGACUACUUCUGUCAAUUUUU   1425 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090062N14, full insert sequence	NA	coding protein	psRNATarget