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BaseInfo

ncRNA ID	novel_osa_miR2856
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:37650184-37650301 [+]
Reference genome	IRGSP-1.0
Source	SRR2040382;SRR2040400;SRR2857735;SRR1612403
Length	24
Mature sequence(if miRNA)	95 - AGAUGUAUAAGUUGAAUUUGAAUU - 118
Stem-loop(if miRNA)	--              -        ACA                U     UG A  UUU   UUCAAAUUCAAUUU UAUAUCUC   ACGAAAAAAAUAAAUU AACUG  A UA   G   |||||||||||||| ||||||||   |||||||||||||||| |||||  | ||   U   AAGUUUAAGUUGAA AUGUAGAG   UGCUUUUUUUGUUUAA UUGAU  U AU   U UU              U        CAA                U     GU G  CAA
Stem-loop sequence	UUCAAAUUCAAUUUUAUAUCUCACAACGAAAAAAAUAAAUUUAACUGUGAAUAUUUGUUAACUAGUUGUAGUUUAAUUUGUUUUUUUCGUAACGAGAUGUAUAAGUUGAAUUUGAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792915.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=||||||||=|||||*||||||| targets:1883   AGUUCAAAUUUAACUUCUACAUCU   1906 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA	UDP-glycosyltransferase 89B1(LOC4345896)	coding protein	psRNATarget
HI404229.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=||*|||||||||||*||||||| targets:26   AGUUGAAAUUCAACUUCUACAUCU   49 Target Full Sequence	1.5	Sequence 2354 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236359.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=||*|||||||||||*||||||| targets:26   AGUUGAAAUUCAACUUCUACAUCU   49 Target Full Sequence	1.5	Sequence 2354 from Patent EP2985353	NA	coding protein	psRNATarget
JB164690.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=||*|||||||||||*||||||| targets:26   AGUUGAAAUUCAACUUCUACAUCU   49 Target Full Sequence	1.5	Sequence 2354 from Patent EP2559767	NA	coding protein	psRNATarget
XM_015793191.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=|**||||||||=|||||||||| targets:448   AGUAAAAAUUCAAUUUAUACAUCU   471 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget
XM_015793197.1	ncRNA:24   UUAAGUUUAAGUUGAAUAUGUAGA   1   |=|**||||||||=|||||||||| targets:450   AGUAAAAAUUCAAUUUAUACAUCU   473 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA	probable receptor-like protein kinase At1g67000(LOC4327950)	coding protein	psRNATarget