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BaseInfo

ncRNA ID	novel_osa_miR2854
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:35970221-35970399 [+]
Reference genome	IRGSP-1.0
Source	SRR2040382
Length	24
Mature sequence(if miRNA)	156 - AAACGUUGGACAUAAACAGUACAA - 179
Stem-loop(if miRNA)	--   -G   UU                 C    UUC     UUAAAAAUUUA          UUAAAAAA    -------CUC    GAAGUACUAUUC   GUG  GUU  UGUGUCCAACGUUUGAU GUCU   UUAUU           UGAAAAAAAU        UAGU          ACAU            A   |||  |||  ||||||||||||||||| ||||   |||||           ||||||||||        ||||          ||||            U   CAU  CAA  AUACAGGUUGCAAAUUG CAGG   AAUAA           ACUUUUUUUA        AUCA          AAUA            G AA   GA   --                 A    UAU     -----------          ---UAAUA    UAAAAAUAAC    AUCUACUAUUUU
Stem-loop sequence	GUGGGUUUUUGUGUCCAACGUUUGAUCGUCUUUCUUAUUUUAAAAAUUUAUGAAAAAAAUUUAAAAAAUAGUCUCACAUGAAGUACUAUUCAUGUUUUAUCAUCUAAUAACAAUAAAAAUACUAAUAAUAUUUUUUUCAAAUAAUAUGGACAGUUAAACGUUGGACAUAAACAGUACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015768707.1	ncRNA:24   AA-CAUGACAAAUACAGGUUGCAAA   1   ||-|*||||||*||||||||||||| targets:1220   UUAGCACUGUUCAUGUCCAACGUUU   1244 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X3, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768705.1	ncRNA:24   AA-CAUGACAAAUACAGGUUGCAAA   1   ||-|*||||||*||||||||||||| targets:1220   UUAGCACUGUUCAUGUCCAACGUUU   1244 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X1, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768708.1	ncRNA:24   AA-CAUGACAAAUACAGGUUGCAAA   1   ||-|*||||||*||||||||||||| targets:1220   UUAGCACUGUUCAUGUCCAACGUUU   1244 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X4, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget
XM_015768706.1	ncRNA:24   AA-CAUGACAAAUACAGGUUGCAAA   1   ||-|*||||||*||||||||||||| targets:1220   UUAGCACUGUUCAUGUCCAACGUUU   1244 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group cysteine-rich repeat secretory protein 15-like (LOC107279942), transcript variant X2, mRNA	cysteine-rich repeat secretory protein 15-like(LOC107279942)	coding protein	psRNATarget