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BaseInfo

ncRNA ID novel_osa_miR2851
Species Oryza sativa
Class miRNA
Genome position Chr12:7129384-7129537 [+]
Reference genome IRGSP-1.0
Source SRR2040382;SRR2040392;SRR2040406;SRR2040407
Length 24
Mature sequence(if miRNA) 131 - AACUGACGGUAGUGGCAUGAGAGG - 154
Stem-loop(if miRNA) --            C                          G               A    -   A   --A    A
  UCUCAUGCCACU CCGUCAGUUGACCGUUAAUUCUCAAG AAAAAAGACGUAUUU CCCU UCU AGU   UAGG C
  |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| ||| |||   |||| A
  AGAGUACGGUGA GGCAGUCAACUGGCAAUUGAGAGUUC UUUUUUCUGUAUAAA GGGA AGA UCA   AUCC U
GG            U                          A               C    G   C   ACA    G
Stem-loop sequence UCUCAUGCCACUCCCGUCAGUUGACCGUUAAUUCUCAAGGAAAAAAGACGUAUUUACCCUUCUAAGUAUAGGACAUGCCUAACAACUCAGAGAGGGCAAAUAUGUCUUUUUUACUUGAGAGUUAACGGUCAACUGACGGUAGUGGCAUGAGAGG