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BaseInfo

ncRNA ID	novel_osa_miR2850
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:6627564-6627612 [+]
Reference genome	IRGSP-1.0
Source	SRR2040382;SRR2040410
Length	24
Mature sequence(if miRNA)	1 - AAUAUCAACCGGGACUAAAGAUCC - 24
Stem-loop(if miRNA)	--                         AAUAUCAACCGGGACUAAAGAUC   ||||||||||||||||||||||C   UUGUGGUUGGCCCUGAUUUCUAU UA
Stem-loop sequence	AAUAUCAACCGGGACUAAAGAUCCUAUCUUUAGUCCCGGUUGGUGUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015755226.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   |||||||||||||||||||||=|| targets:69   GGAUCUUUAGUCCCGGUUGAUGUU   92 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK121178.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   *||||||||||||||||||=|||| targets:1907   CGAUCUUUAGUCCCGGUUGGUAUU   1930 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023083G22, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   ||||||||||||||||||||||** targets:1259   GGAUCUUUAGUCCCGGUUGAUAAC   1282 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
XM_015790121.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   **|||||||||||||||||=|||* targets:928   UAAUCUUUAGUCCCGGUUGGUAUG   951 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance protein RGA4 (LOC107281518), transcript variant X2, mRNA	putative disease resistance protein RGA4(LOC107281518)	coding protein	psRNATarget
XM_015755884.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   **|||||||||||||||||=|||* targets:1373   UUAUCUUUAGUCCCGGUUGGUAUA   1396 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group S-norcoclaurine synthase 1 (LOC4346830), mRNA	S-norcoclaurine synthase 1(LOC4346830)	coding protein	psRNATarget
AK065811.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   **||||||||||||||||||*||* targets:1871   CCAUCUUUAGUCCCGGUUGAAAUA   1894 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget
CT837755.1	ncRNA:24   CCUAGAAAUCAGGGCCAACUAUAA   1   **||=|||||||||||||||*||* targets:1903   CCAUUUUUAGUCCCGGUUGAAAUA   1926 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA248M21, full insert sequence	NA	coding protein	psRNATarget
AK065634.1	ncRNA:24   CCUA------GAAAUCAGGGCCAACUAUAA   1   *|||------=|||||||||||||||*||* targets:1893   AGAUGUCCAGUUUUAGUCCCGGUUGAAAUA   1922 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013034I10, full insert sequence	NA	coding protein	psRNATarget