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BaseInfo

ncRNA ID novel_osa_miR2846
Species Oryza sativa
Class miRNA
Genome position Chr6:3951146-3951206 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR4407955;SRR4407956;SRR1556020
Length 21
Mature sequence(if miRNA) 41 - UCUGCGGGACGAAUUUUUUAA - 61
Stem-loop(if miRNA) --U      GAC          AGCC      A
   CUGCGG   GAAUUUUUUA    UAAUUA U
   ||||||   ||||||||||    |||||| C
   GAUGUC   UUUGAAAAGU    AUUAAU C
UAC      --A          ----      A
Stem-loop sequence UCUGCGGGACGAAUUUUUUAAGCCUAAUUAAUCCAUAAUUAUGAAAAGUUUACUGUAGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242281.1
ncRNA:21   AAUUUUUUAAGCAGGGCGUCU   1
  ||||||||||||||=||||||
targets:1751   UUAAAAAAUUCGUCUCGCAGA   1771

1.5 Oryza sativa Japonica Group cDNA, clone: J075189D01, full insert sequence NA coding protein psRNATarget