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BaseInfo

ncRNA ID novel_osa_miR2845
Species Oryza sativa
Class miRNA
Genome position Chr12:15998433-15998559 [-]
Reference genome IRGSP-1.0
Source SRR2040382
Length 23
Mature sequence(if miRNA) 105 - AUAAGACAUAGUUUCAUCGGUGU - 127
Stem-loop(if miRNA) ---AU   -        ----------------    - G UGUUGGUUUUGUUAUUCAGAUGGGCUUGGGCG
     AAG ACAUAGUU                UCAU C G                                C
     ||| ||||||||                |||| | |                                G
     UUC UGUAUUAG                CCAG G G                                G
UUUAU   A        UAUUUAUAUUGUGUGA    U - UUUACCUUUUCUGGAUUGAUUAAUUUACGGUA
Stem-loop sequence AUAAGACAUAGUUUCAUCGGUGUUGGUUUUGUUAUUCAGAUGGGCUUGGGCGCGGAUGGCAUUUAAUUAGUUAGGUCUUUUCCAUUUGGUGACCAGUGUGUUAUAUUUAUGAUUAUGUACUUUAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015773789.1
ncRNA:23   UGUGGCUACUUUGAUACAGAAUA   1
  **|=|||*|||||||||||||*|
targets:627   UAAUCGAGGAAACUAUGUCUUCU   649

2.5 PREDICTED: Oryza sativa Japonica Group indole-3-pyruvate monooxygenase YUCCA2 (LOC9267047), transcript variant X4, mRNA indole-3-pyruvate monooxygenase YUCCA2(LOC9267047) coding protein psRNATarget