ncRNA ID | novel_osa_miR2845 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr12:15998433-15998559 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR2040382 |
Length | 23 |
Mature sequence(if miRNA) | 105 - AUAAGACAUAGUUUCAUCGGUGU - 127 |
Stem-loop(if miRNA) |
---AU   -        ----------------    - G UGUUGGUUUUGUUAUUCAGAUGGGCUUGGGCG      AAG ACAUAGUU                UCAU C G                                C      ||| ||||||||                |||| | |                                G      UUC UGUAUUAG                CCAG G G                                G UUUAU   A        UAUUUAUAUUGUGUGA    U - UUUACCUUUUCUGGAUUGAUUAAUUUACGGUA |
Stem-loop sequence | AUAAGACAUAGUUUCAUCGGUGUUGGUUUUGUUAUUCAGAUGGGCUUGGGCGCGGAUGGCAUUUAAUUAGUUAGGUCUUUUCCAUUUGGUGACCAGUGUGUUAUAUUUAUGAUUAUGUACUUUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015773789.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group indole-3-pyruvate monooxygenase YUCCA2 (LOC9267047), transcript variant X4, mRNA | indole-3-pyruvate monooxygenase YUCCA2(LOC9267047) | coding protein | psRNATarget |