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BaseInfo

ncRNA ID ath-miR3932b-5p
Species Arabidopsis thaliana
Class miRNA
Genome position chr4:7890570-7890719 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 126 - UUUGACGUGCUCGAUCUGCUC - 146
Stem-loop(if miRNA) AGUGUUUGACGUGCUC    U   CCUUUA       A             U   UUCAAA   A A    UU   GA  UU
                GAUC GCU      UGUCUUC UUGUCAUCACAAA UUC      CUU A UAUC  AAG  CC  C
                |||| |||      ||||||| ||||||||||||| |||      ||| | ||||  |||  ||
                CUAG CGA      ACAGAAG AACAGUAGUGUUU AAG      GAG U AUAG  UUC  GG  A
--------GAACUAAA    U   -----C       C             C   CAAUUA   A A    --   -A  CC
Stem-loop sequence AGUGUUUGACGUGCUCGAUCUGCUCCUUUAUGUCUUCAUUGUCAUCACAAAUUUCUUCAAACUUAAAUAUCUUAAGGACCUUCACCGGACUUGAUAAUAGAGAUUAACGAACUUUGUGAUGACAACGAAGACACAGCUGAUCAAAUCAAG

Reference

1 PMID:20621980
"siRNAs from miRNA sites mediate DNA methylation of target genes";
Chellappan P, Xia J, Zhou X, Gao S, Zhang X, Coutino G, Vazquez F, Zhang W, Jin H;
Nucleic Acids Res. 38:6883-6894(2010).