ncRNA ID | ath-miR3932b-5p |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr4:7890570-7890719 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 126 - UUUGACGUGCUCGAUCUGCUC - 146 |
Stem-loop(if miRNA) |
AGUGUUUGACGUGCUC    U   CCUUUA       A             U   UUCAAA   A A    UU   GA  UU                 GAUC GCU      UGUCUUC UUGUCAUCACAAA UUC      CUU A UAUC  AAG  CC  C                 |||| |||      ||||||| ||||||||||||| |||      ||| | ||||  |||  ||                 CUAG CGA      ACAGAAG AACAGUAGUGUUU AAG      GAG U AUAG  UUC  GG  A --------GAACUAAA    U   -----C       C             C   CAAUUA   A A    --   -A  CC |
Stem-loop sequence | AGUGUUUGACGUGCUCGAUCUGCUCCUUUAUGUCUUCAUUGUCAUCACAAAUUUCUUCAAACUUAAAUAUCUUAAGGACCUUCACCGGACUUGAUAAUAGAGAUUAACGAACUUUGUGAUGACAACGAAGACACAGCUGAUCAAAUCAAG |
1 | PMID:20621980
"siRNAs from miRNA sites mediate DNA methylation of target genes"; Chellappan P, Xia J, Zhou X, Gao S, Zhang X, Coutino G, Vazquez F, Zhang W, Jin H; Nucleic Acids Res. 38:6883-6894(2010). |