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BaseInfo

ncRNA ID novel_osa_miR2837
Species Oryza sativa
Class miRNA
Genome position Chr12:19900379-19900559 [+]
Reference genome IRGSP-1.0
Source SRR2040381
Length 24
Mature sequence(if miRNA) 158 - GUUGGACACAGAUAUCGACGGCUG - 181
Stem-loop(if miRNA) GUUUU  ----AC     A        A       A   A             UU     U   UAGU         U    -AA     AAU G
     GC      UGUUU UGUUCAAC UUUGACC UUC UCUUAUUUGAAAA  UUAUA AAU    UUUUUUAGA GAUA   GCAUG   A U
     ||      ||||| |||||||| ||||||| ||| |||||||||||||  ||||| |||    ||||||||| ||||   |||||   |
     CG      AUAGA ACAGGUUG AAACUGG AGG AGAAUAAAUUUUU  AAUAU UUA    AAAAAAUUU UUAU   UGUAU   U A
---GU  GCAGCU     C        C       C   C             UU     -   -UAU         -    CAG     AUU A
Stem-loop sequence GUUUUGCACUGUUUAUGUUCAACAUUUGACCAUUCAUCUUAUUUGAAAAUUUUAUAUAAUUAGUUUUUUUAGAUGAUAAAGCAUGAAUAGUAAUUUAUAUGUGACUAUUUUUAAAAAAUAUAUUUAUAAUUUUUUUAAAUAAGACGGACGGUCAAACGUUGGACACAGAUAUCGACGGCUG