Search result

BaseInfo

ncRNA ID novel_osa_miR2833
Species Oryza sativa
Class miRNA
Genome position Chr11:13448594-13448668 [+]
Reference genome IRGSP-1.0
Source SRR2040381
Length 21
Mature sequence(if miRNA) 1 - UGACGGGCUGUAGUUUAGGCC - 21
Stem-loop(if miRNA) --             -          A        ACA
  UGACGGGCUGUAG UUUAGGCCUG UUGAGAUA   U
  ||||||||||||| |||||||||| ||||||||
  ACUGCCCGGCGUU AAGUCCGGGC AACUCUAU   U
AC             G          A        ACC
Stem-loop sequence UGACGGGCUGUAGUUUAGGCCUGAUUGAGAUAACAUUCCAUAUCUCAAACGGGCCUGAAGUUGCGGCCCGUCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015779200.1
ncRNA:21   CCGGAUUUGAUGUCGGGCAGU   1
  ||||||||||||=||||||||
targets:59   GGCCUAAACUACGGCCCGUCA   79

1.5 PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1-like (LOC107276703), mRNA L-type lectin-domain containing receptor kinase IX.1-like(LOC107276703) coding protein psRNATarget