ncRNA ID | novel_osa_miR2833 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:13448594-13448668 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR2040381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACGGGCUGUAGUUUAGGCC - 21 |
Stem-loop(if miRNA) |
--             -          A        ACA   UGACGGGCUGUAG UUUAGGCCUG UUGAGAUA   U   ||||||||||||| |||||||||| ||||||||   ACUGCCCGGCGUU AAGUCCGGGC AACUCUAU   U AC             G          A        ACC |
Stem-loop sequence | UGACGGGCUGUAGUUUAGGCCUGAUUGAGAUAACAUUCCAUAUCUCAAACGGGCCUGAAGUUGCGGCCCGUCACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015779200.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group L-type lectin-domain containing receptor kinase IX.1-like (LOC107276703), mRNA | L-type lectin-domain containing receptor kinase IX.1-like(LOC107276703) | coding protein | psRNATarget |