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BaseInfo

ncRNA ID novel_osa_miR2831
Species Oryza sativa
Class miRNA
Genome position Chr6:6289113-6289169 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1556020
Length 24
Mature sequence(if miRNA) 34 - AAAGAUCGAUCUUUAGUUCCGGUU - 57
Stem-loop(if miRNA) --        --              UUU
  AAAGAUCG  AUCUUUAGUUCCGG   U
  ||||||||  ||||||||||||||   U
  UUUCUAGC  UAGAAAUCAGGGCC   U
GA        GA              CAC
Stem-loop sequence AAAGAUCGAUCUUUAGUUCCGGUUUUUUCACCCGGGACUAAAGAUAGCGAUCUUUAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288796.1
ncRNA:24   UUGGCCUUGAUUUCUAGCUAGAAA   1
  ||||||=|||||||||||||||||
targets:1813   AACCGGGACUAAAGAUCGAUCUUU   1836

1.0 Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence NA coding protein psRNATarget
AK288167.1
ncRNA:24   UUGGCCUUGAUUUCUAGCUAGAAA   1
  |*||||=|||||||||||||||||
targets:1766   ACCCGGGACUAAAGAUCGAUCUUU   1789

1.0 Oryza sativa Japonica Group cDNA, clone: J090002K22, full insert sequence NA coding protein psRNATarget