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BaseInfo

ncRNA ID novel_osa_miR2826
Species Oryza sativa
Class miRNA
Genome position Chr6:8875995-8876047 [-]
Reference genome IRGSP-1.0
Source SRR1555747;SRR1555749;SRR1556016;SRR1556020
Length 24
Mature sequence(if miRNA) 30 - GGAAACUUGGAAACUAUCGUUGGA - 53
Stem-loop(if miRNA) --             C       GGA
  GGAAACUUGGAAA UAUCGUU   U
  ||||||||||||| |||||||   C
  CCUUUGAAUCUUU AUGGUAA   G
CA             A       AGA
Stem-loop sequence GGAAACUUGGAAACUAUCGUUGGAUCGAGAAAUGGUAAUUUCUAAGUUUCCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288582.1
ncRNA:24   AGGUUGCUAUCAAAGGUUCAAAGG   1
  ||=||||=|||||||||||||||=
targets:218   UCUAACGGUAGUUUCCAAGUUUCU   241

2.0 Oryza sativa Japonica Group cDNA, clone: J090049I19, full insert sequence NA coding protein psRNATarget